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Information-based clustering.(English)Zbl 1135.62054

Summary: In an age of increasingly large data sets, investigators in many different disciplines have turned to clustering as a tool for data analysis and exploration. Existing clustering methods, however, typically depend on several nontrivial assumptions about the structure of the data. We reformulate the clustering problem from an information theoretic perspective that avoids many of these assumptions. In particular, our formulation obviates the need for defining a cluster “prototype”, does not require an a priori similarity metric, is invariant to changes in the representation of the data, and naturally captures nonlinear relations. We apply this approach to different domains and find that it consistently produces clusters that are more coherent than those extracted by existing algorithms. Finally, our approach provides a way of clustering based on collective notions of similarity rather than the traditional pairwise measures.

MSC:

62H30 Classification and discrimination; cluster analysis (statistical aspects)
62B10 Statistical aspects of information-theoretic topics
62P10 Applications of statistics to biology and medical sciences; meta analysis

Cite

References:

[1]Brown, Nature genetics 21 (1 Suppl) pp 33– (1999) ·doi:10.1038/4462
[2]Eisen, PNAS 95 (25) pp 14863– (1998) ·doi:10.1073/pnas.95.25.14863
[3]ACM COMPUT SURV 31 pp 264– (1999) ·doi:10.1145/331499.331504
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[5]33 pp 617– (2000) ·doi:10.1016/S0031-3203(99)00076-X
[6]PROC. IEEE 86 pp 2210– (1998) ·doi:10.1109/5.726788
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[10]Ashburner, Nature genetics 25 (1) pp 25– (2000) ·doi:10.1038/75556
[11]Bioinformatics 20 (9) pp 1453– (2004) ·Zbl 1078.92024 ·doi:10.1093/bioinformatics/bth078
[12]PHYSICAL REVIEW LETTERS 91 pp 2387014– (2003)
[13]Bowers, Science 306 (5705) pp 2246– (2004) ·doi:10.1126/science.1103330
This reference list is based on information provided by the publisher or from digital mathematics libraries. Its items are heuristically matched to zbMATH identifiers and may contain data conversion errors. In some cases that data have been complemented/enhanced by data from zbMATH Open. This attempts to reflect the references listed in the original paper as accurately as possible without claiming completeness or a perfect matching.
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