Experimental Data Snapshot
Starting Model:experimental
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(2012) ACS Chem Biol 7: 1830-1839
G protein-coupled receptor kinase 2 (GRK2) is a well-established therapeutic target for the treatment of heart failure. Herein we identify the selective serotonin reuptake inhibitor (SSRI) paroxetine as a selective inhibitor of GRK2 activity both in vitro and in living cells. In the crystal structure of the GRK2·paroxetine-Gβγ complex, paroxetine binds in the active site of GRK2 and stabilizes the kinase domain in a novel conformation in which a unique regulatory loop forms part of the ligand binding site. Isolated cardiomyocytes show increased isoproterenol-induced shortening and contraction amplitude in the presence of paroxetine, and pretreatment of mice with paroxetine before isoproterenol significantly increases left ventricular inotropic reserve in vivo with no significant effect on heart rate. Neither is observed in the presence of the SSRI fluoxetine. Our structural and functional results validate a widely available drug as a selective chemical probe for GRK2 and represent a starting point for the rational design of more potent and specific GRK2 inhibitors.
 Explore in 3D: Structure |Sequence Annotations |Electron Density |Validation Report |Ligand Interaction (8PR)
Biological assembly 1 assigned by authors and generated by PISA (software)
Macromolecule Content 
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| G-protein coupled receptor kinase 2 | 689 | Homo sapiens | Mutation(s): 0  Gene Names: ADRBK1, BARK, BARK1, GRK2 EC: 2.7.11.15 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P25098 (Homo sapiens) Explore P25098  Go to UniProtKB:  P25098 | |||||
PHAROS:  P25098 GTEx:  ENSG00000173020  | |||||
Entity Groups  | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P25098 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | 340 | Bos taurus | Mutation(s): 0  Gene Names: GNB1 | ![]() | |
UniProt | |||||
Find proteins for P62871 (Bos taurus) Explore P62871  Go to UniProtKB:  P62871 | |||||
Entity Groups  | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62871 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | C [auth G] | 77 | Bos taurus | Mutation(s): 1  Gene Names: GNG2 | ![]() |
UniProt | |||||
Find proteins for P63212 (Bos taurus) Explore P63212  Go to UniProtKB:  P63212 | |||||
Entity Groups  | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P63212 | ||||
Sequence AnnotationsExpand | |||||
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| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 8PR Query on 8PR Download Ideal Coordinates CCD File  | D [auth A] | Paroxetine C19 H20 F N O3 AHOUBRCZNHFOSL-YOEHRIQHSA-N | |||
| MG Query on MG Download Ideal Coordinates CCD File  | E [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 194.973 | α = 90 |
| b = 71.011 | β = 110.41 |
| c = 111.169 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MD2 | data collection |
| PHASER | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
RCSB PDB Core Operations are funded by theU.S. National Science Foundation (DBI-2321666), theUS Department of Energy (DE-SC0019749), and theNational Cancer Institute,National Institute of Allergy and Infectious Diseases, andNational Institute of General Medical Sciences of theNational Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.