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RCSB PDB
233,605 Structures from the PDB
1,068,577 Computed Structure Models (CSM)
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 1C17|pdb_00001c17

A1C12 SUBCOMPLEX OF F1FO ATP SYNTHASE


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 20 
  • Conformers Submitted: 
  • Selection Criteria: structures with the least restraint violations 

wwPDB Validation  3D Report Full Report

Currently 1C17 does not have a validation slider image.


This is version 1.4 of the entry. See complete history


Literature

Structural changes linked to proton translocation by subunit c of the ATP synthase.

Rastogi, V.K.Girvin, M.E.

(1999) Nature 402: 263-268

  • PubMed10580496 Search on PubMed
  • DOI: https://doi.org/10.1038/46224
  • Primary Citation of Related Structures:  
    1C17,1C99

  • PubMed Abstract: 

    F1F0 ATP synthases use a transmembrane proton gradient to drive the synthesis of cellular ATP. The structure of the cytosolic F1 portion of the enzyme and the basic mechanism of ATP hydrolysis by F1 are now well established, but how proton translocation through the transmembrane F0 portion drives these catalytic changes is less clear. Here we describe the structural changes in the proton-translocating F0 subunit c that are induced by deprotonating the specific aspartic acid involved in proton transport. Conformational changes between the protonated and deprotonated forms of subunit c provide the structural basis for an explicit mechanism to explain coupling of proton translocation by F0 to the rotation of subunits within the core of F1. Rotation of these subunits within F1 causes the catalytic conformational changes in the active sites of F1 that result in ATP synthesis.


  • Organizational Affiliation

    Biochemistry Department, Albert Einstein College of Medicine, Bronx, New York 10461, USA.

Biological Assembly 1  

 Explore in 3DStructure |Sequence Annotations |Validation Report |Predict Membrane 


Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 13-mer - A12B1 
Local Symmetry: Cyclic - C12  (Explore in 3D)
Local Stoichiometry: Homo 12-mer - A12 

Local Symmetry: Cyclic - C12  (Explore in 3D)
Local Stoichiometry: Homo 12-mer - A12 

Find Similar Assemblies

Biological assembly 1 assigned by authors.

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Macromolecule Content

  • Total Structure Weight: 118.98 kDa 
  • Atom Count: 8,030 
  • Modelled Residue Count: 1,090 
  • Deposited Residue Count: 1,125 
  • Unique protein chains: 2

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ATP SYNTHASE SUBUNIT C
A,B,C,D,E
A,B,C,D,E,F,G,H,I,J,K,L
79Escherichia coliMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for P68699 (Escherichia coli (strain K12))
Explore P68699 
Go to UniProtKB:  P68699
Entity Groups 
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP68699
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
ATP SYNTHASE SUBUNIT A177Escherichia coliMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for P0AB98 (Escherichia coli (strain K12))
Explore P0AB98 
Go to UniProtKB:  P0AB98
Entity Groups 
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0AB98
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 20 
  • Conformers Submitted: 
  • Selection Criteria: structures with the least restraint violations 

Structure Validation

View Full Validation Report

Currently 1C17 does not have a validation slider image.



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1999-11-24
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2022-02-16
    Changes: Database references, Derived calculations
  • Version 1.4: 2024-05-22
    Changes: Data collection

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RCSB PDB Core Operations are funded by theU.S. National Science Foundation (DBI-2321666), theUS Department of Energy (DE-SC0019749), and theNational Cancer Institute,National Institute of Allergy and Infectious Diseases, andNational Institute of General Medical Sciences of theNational Institutes of Health under grant R01GM157729.


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