RCSB PDB gratefully acknowledges access and support for software tools from:
 | ACD/Labs:ACD/Name is a tool that generates chemical names from structure according to IUPAC rules. ACD/Name can also convert chemical names to structures. ACD/Name handles challenging areas of nomenclature including biochemical, inorganic, and organometallic structures and polymers. RCSB PDB usesACD/Name to generate chemical names for each of the molecules in the Chemical Component Dictionary. |
 | Cambridge Crystallographic Data Centre: RCSB PDB uses CCDC software to generate chemical component matching between the CSD and PDB archives and the ligand quality displays on RCSB.org. |
 | ChemAxon: RCSB PDB uses the web-based chemical drawing toolMarvin JS to compose chemical sketches for chemical similar and substructure searches. |
 | OpenEye, Cadence Molecular Sciences: The OpenEye cheminformatics suite of toolkits including: OEChem TK, core chemistry handling and representation; OEDepict TK, 2D Molecule rendering and depiction; MolProp TK, molecular property calculation and filtering; and Quacpac TK, tautomer enumeration and charge assignment. RCSB PDB uses OpenEye toolkits for image generation and searching small molecule constituents in PDB entries. |
RCSB PDB would also like to acknowledge the many open source tools that are used in the production and delivery of the website. Some of the major open-source tools used include:
RCSB PDB integratesData From External Resources for searching and analysis.
A list of software programs used by the wwPDB during OneDep deposition and validation is available.
