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CAST/EiJStrain Detail
Summary
  • Strain Name
    CAST/EiJ
  • Attributes
    inbred strain, wild-derived
  • MGI ID
    MGI:2159793
  • Synonyms
    Castaneus Eicher
  • Collection
    DO/CC Founder
SNPs
more
SNP Profile Heat Map
  • SNP Calls Involving CAST/EiJ
    2,560,674,386 from dbSNP Build 142
  • Comparison Strains
    99
Associated
Mutations,
Markers,
and QTL
3 associated mutationsShow All
222 associated QTLShow All
AlleleMarker
Ahl6CAST/EiJAhl6
Ari4CAST/EiJAri4
Ari5CAST/EiJAri5
Ari7CAST/EiJAri7
Ari8CAST/EiJAri8
Ars13CAST/EiJArs13
Ars14CAST/EiJArs14
Ars15CAST/EiJArs15
Ars16CAST/EiJArs16
Ars17CAST/EiJArs17
Ars18CAST/EiJArs18
Ars19CAST/EiJArs19
Ars20CAST/EiJArs20
Ars21CAST/EiJArs21
Ars22CAST/EiJArs22
Ars23CAST/EiJArs23
Ars24CAST/EiJArs24
ArtlesCAST/EiJArtles
Asprl2CAST/EiJAsprl2
Asprl4CAST/EiJAsprl4
Bccad1CAST/EiJBccad1
Bcdr1CAST/EiJBcdr1
Bcmd2CAST/EiJBcmd2
Bdln2CAST/EiBdln2
Bdlnq7CAST/EiJBdlnq7
Bmd1CAST/EiJBmd1
Bmd1aCAST/EiJBmd1a
Bmd1bCAST/EiJBmd1b
Bmd1cCAST/EiJBmd1c
Bmd2CAST/EiJBmd2
Bmd3CAST/EiJBmd3
Bmd4CAST/EiJBmd4
Bmd5CAST/EiJBmd5
Bmd13CAST/EiJBmd13
Bmd38CAST/EiJBmd38
Brwq1CAST/EiJBrwq1
Bwfq1CAST/EiJBwfq1
Bwfq2CAST/EiJBwfq2
Bwq15CAST/EiJBwq15
Bwq16CAST/EiJBwq16
Bwq17CAST/EiJBwq17
Bwq18CAST/EiJBwq18
Cara1CAST/EiJCara1
Cara2CAST/EiJCara2
Cara3CAST/EiJCara3
Carfhg1CAST/EiJCarfhg1
Carfhg2CAST/EiJCarfhg2
Carp1CAST/EiJCarp1
Carp2CAST/EiJCarp2
Carp3CAST/EiJCarp3
Cdtm1CAST/EiJCdtm1
Cdtm2CAST/EiJCdtm2
Chol6CAST/EiChol6
Col4a1m1CAST/EiJCol4a1m1
Dob9CAST/EiJDob9
Dpc1CAST/EiJDpc1
Dpn1CAST/EiJDpn1
Era1CAST/EiJEra1
Fatmq1CAST/EiJFatmq1
Fatmq2CAST/EiJFatmq2
Fatpad1CAST/EiJFatpad1
Fatpad2CAST/EiJFatpad2
Fatpad3CAST/EiJFatpad3
Fatpad4CAST/EiJFatpad4
Fatpad5CAST/EiJFatpad5
Fatpad6CAST/EiJFatpad6
Fatpad7CAST/EiJFatpad7
Feml1CAST/EiJFeml1
Feml2CAST/EiJFeml2
Feml3CAST/EiJFeml3
Feml4CAST/EiJFeml4
Gbvq1CAST/EiJGbvq1
Gf7CAST/EiJGf7
Gfpq1CAST/EiJGfpq1
Gipc3ahl5-CAST/EiJGipc3
Gwth1CAST/EiJGwth1
Gwth2CAST/EiJGwth2
Gwth3CAST/EiJGwth3
Gwth4CAST/EiJGwth4
Gwth5CAST/EiJGwth5
Gwth6CAST/EiJGwth6
Gwth7CAST/EiJGwth7
Hdl1CAST/EiJHdl1
Hdl2CAST/EiJHdl2
Hdl3CAST/EiJHdl3
Hdl4CAST/EiJHdl4
Hdlq12CAST/EiJHdlq12
Heal12CAST/EiJHeal12
Heal13CAST/EiJHeal13
Heal15CAST/EiJHeal15
Heal23CAST/EiJHeal23
Heal24CAST/EiJHeal24
Heal25CAST/EiJHeal25
Hivan1CAST/EiJHivan1
HrI1CAST/EiJHrI1
Hrsq4CAST/EiJHrsq4
Hrsq8CAST/EiJHrsq8
Hrsq9CAST/EiJHrsq9
Hsm1CAST/EiJHsm1
Hwtf1CAST/EiJHwtf1
Hwtf2CAST/EiJHwtf2
Idd3CAST/EiJIdd3
Igly1CAST/EiJIgly1
Igly2CAST/EiJIgly2
Igly4CAST/EiJIgly4
Igly5CAST/EiJIgly5
Igly6CAST/EiJIgly6
Igly7CAST/EiJIgly7
Igly8CAST/EiJIgly8
Kcal1CAST/EiJKcal1
Kcal2CAST/EiJKcal2
Kcal3CAST/EiJKcal3
Kwq13CAST/EiJKwq13
Kwq14CAST/EiJKwq14
Kwq15CAST/EiJKwq15
Lith12CAST/EiJLith12
Lith13CAST/EiJLith13
Lith14CAST/EiJLith14
Lrdm1CAST/EiJLrdm1
Lrdm2CAST/EiJLrdm2
Lwq9CAST/EiJLwq9
Malrd1CAST/EiJMalrd1
Mlh1fc1CAST/EiJMlh1fc1
Mlh1fc2CAST/EiJMlh1fc2
Mlh1fc3CAST/EiJMlh1fc3
Mnic1CAST/EiJMnic1
Mnic2CAST/EiJMnic2
Mnic3CAST/EiJMnic3
Mnif1CAST/EiJMnif1
Mnif2CAST/EiJMnif2
Mnif3CAST/EiJMnif3
Mobq5CAST/EiJMobq5
Mobq6CAST/EiJMobq6
Mobq7CAST/EiJMobq7
Mobq8CAST/EiJMobq8
Modvl2CAST/EiJModvl2
Mohg1CAST/EiJMohg1
Mohg2CAST/EiJMohg2
Mohg3CAST/EiJMohg3
Mohg4CAST/EiJMohg4
Mohg5CAST/EiJMohg5
Mohg6CAST/EiJMohg6
Mohg7CAST/EiJMohg7
Mohg8CAST/EiJMohg8
Mohg9CAST/EiJMohg9
Mopkd1CAST/EiJMopkd1
Mopkd2CAST/EiJMopkd2
Nihlr1CAST/EiJNihlr1
Nihls1CAST/EiJNihls1
Nociq4CAST/EiJNociq4
Ofdi2CAST/EiJOfdi2
Orgwt1CAST/EiJOrgwt1
Orgwt2CAST/EiJOrgwt2
Orgwt3CAST/EiJOrgwt3
Orgwt4CAST/EiJOrgwt4
Orgwt5CAST/EiJOrgwt5
Orgwt6CAST/EiJOrgwt6
Orgwt7CAST/EiJOrgwt7
Orgwt8CAST/EiJOrgwt8
Paasd1CAST/EiJPaasd1
Pbsq1CAST/EiJPbsq1
Pbwg1.10CAST/EiJPbwg1.10
PlepCAST/EiJPlep
Pstc6CAST/EiJPstc6
Rabt1CAST/EiJRabt1
Rd6m1CAST/EiJRd6m1
Recrq1CAST/EiJRecrq1
Recrq2CAST/EiJRecrq2
Recrq3CAST/EiJRecrq3
Recrq4CAST/EiJRecrq4
Recrq5CAST/EiJRecrq5
Recrq6CAST/EiJRecrq6
Recrq7CAST/EiJRecrq7
RencdCAST/EiJRencd
Sccor1CAST/EiJSccor1
Sccor2CAST/EiJSccor2
ScholCAST/EiJSchol
Slt1CAST/EiJSlt1
Slt2CAST/EiJSlt2
Slt3CAST/EiJSlt3
Slt4CAST/EiJSlt4
Slt5CAST/EiJSlt5
Smdq1CAST/EiJSmdq1
Smdq2CAST/EiJSmdq2
Smdq3CAST/EiJSmdq3
Stheal11CAST/EiJStheal11
Stheal12CAST/EiJStheal12
Stheal13CAST/EiJStheal13
Stheal14CAST/EiJStheal14
Stsl1CAST/EiJStsl1
Swq6CAST/EiJSwq6
Syncl1CAST/EiJSyncl1
Syncl2CAST/EiJSyncl2
Syncl3CAST/EiJSyncl3
TabwCAST/EiJTabw
TafatCAST/EiJTafat
Tailq7CAST/EiJTailq7
Tailq8CAST/EiJTailq8
Tanidd1CAST/EiJTanidd1
Tanidd3CAST/EiJTanidd3
Tcq1CAST/EiJTcq1
Tcq2CAST/EiJTcq2
Tcq10CAST/EiJTcq10
Tfv1CAST/EiJTfv1
Tglq7CAST/EiJTglq7
Tip1CAST/EiJTip1
Tip3CAST/EiJTip3
Tip4CAST/EiJTip4
Vpq1CAST/EiJVpq1
Vpq2CAST/EiJVpq2
Vpq3CAST/EiJVpq3
Wg1CAST/EiJWg1
Wg2CAST/EiJWg2
Wg2aCAST/EiJWg2a
Wg2bCAST/EiJWg2b
Wg2cCAST/EiJWg2c
Wg2dCAST/EiJWg2d
Wg3CAST/EiJWg3
Wg4CAST/EiJWg4
Wg5CAST/EiJWg5
Wg6CAST/EiJWg6
Wg7CAST/EiJWg7
Associated
Phenotypes
and
Diseases
Phenotype Overview

Phenotype Overview
Blue squares indicate phenotypes directly attributed to mutations/alleles in this strain.
adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
normal phenotype
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Human Diseases

model 1
COVID-19 √
Key√disease modelexpected model not found
Find Mice (IMSR)
1 associated strain record at IMSR
IMSRRepositoryIMSR StrainWhy Matched
JAX:000928 JAX CAST/EiJ exact match to ID
References
  • Earliest
    J:7560 Taylor BA, et al., Genes for serum amyloid A proteins map to Chromosome 7 in the mouse. Mol Gen Genet. 1984;195(3):491-9
  • All
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support.		 last database update
03/25/2025
MGI 6.24		The Jackson Laboratory
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