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CogStack /MedCAT

Star479

Medical Concept Annotation Tool

nlp natural-language-processing information-extraction healthcare learn snomed ner collaborate umls electronic-health-records covid-19

UpdatedMar 18, 2025
Python

🦉 Snow Owl Terminology Server - a production-ready, scalable, FHIR Terminology Service compliant server that supports SNOMED CT International and Extensions, LOINC, RxNorm, UMLS, ICD-10, custom code systems and many others

java elasticsearch owl ontology healthcare knowledge-graph fhir snomed loinc terminology fhir-server snomed-ct icd fhir-api terminology-server conceptmap codesystem valueset

UpdatedMar 14, 2025
Java

wardle /hermes

Star184

A library and microservice implementing the health and care terminology SNOMED CT with support for cross-maps, inference, fast full-text search, autocompletion, compositional grammar and the expression constraint language.

clojure lmdb health healthcare drugs lucene snomed icd-10 terminology diagnoses snomed-ct medications terminology-server

UpdatedFeb 26, 2025
Clojure

IHTSDO /SNOMED-in-5-minutes

Star126

Easy-to-use tutorials for accessing SNOMED APIs within 5 min using various programming languages

javascript python java csharp curl snomed snomed-api

UpdatedJan 5, 2025
Java

IHTSDO /snomed-database-loader

Star113

Represent SNOMED CT in a different types of databases

database snomed

UpdatedJan 23, 2025
Python

IHTSDO /sct-browser-frontend

Star87

HMTL & Javascript for the front end for the SNOMED CT Browser.

javascript snomed

UpdatedFeb 21, 2025
JavaScript

CogStack /MedCATtrainer

Star79

A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.

nlp machine-learning snomed umls active-learning medcat

UpdatedMar 18, 2025
Python

IHTSDO /sct-snapshot-rest-api

Star60

Rest API for SNOMED CT Snapshot views, powered by Node.js, Express & MongoDB

nodejs javascript mongodb snomed

UpdatedApr 14, 2022
JavaScript

IHTSDO /health-data-analytics

Star46

Snolytical - Health Data Analytics Demonstrator

opensource healthcare data-analysis snomed snomed-ct snomed-api

UpdatedJan 5, 2025
Java

cthoyt /umls_downloader

Sponsor

Star40

Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically

python reproducible-research snomed reproducibility umls rxnorm snomed-ct semmeddb

UpdatedApr 2, 2024
Python

wardle /hades

Star36

A FHIR terminology server.

healthcare fhir snomed terminology snomed-ct

UpdatedFeb 22, 2025
Clojure

CogStack /MedCATservice

Star20

Running MedCAT as a RESTful web service

python nlp docker flask microservices rest spacy snomed umls

UpdatedFeb 26, 2025
Python

logicahealth /komet

Star18

Informatics Analytic Architecture—A dynamic semantic architecture for the analysis of models, logic, and language.

javafx java-8 informatics terminology-management snomed loinc terminology isaac rxnorm terminology-extraction stamp-versioning solor

UpdatedNov 16, 2022
Java

clips /humumls

Star18

UMLS in Python with MongoDB.

mongodb snomed umls cui

UpdatedDec 7, 2018
Python

logicahealth /solor-doc

Star16

Documentation for Solor Knowledge Architecture and Knowledge Management Environment

html pdf architecture informatics snomed loinc rxnorm docbook5 komet isaacs-komet stamp-versioning solor

UpdatedSep 1, 2022
XSLT

SALUD-AR /Open-RSD

Star16

Proyecto educativo, que muestra cómo un sistema se conecta con la Red de Salud Digital, parte de la Estrategia de Salud Digital de la República Argentina.

levenshtein-distance fhir snomed argentina fhir-client snomed-ct snowstorm soundex-algorithm red-salud-digital