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jackwasey /icd

Star243

*New maintainer/owner needed* Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.

cran icd-10 icd-9 comorbidity comorbidities charlson icd charlson-comorbidity-index icd-codes

UpdatedDec 20, 2024
R

A library and microservice implementing the health and care terminology SNOMED CT with support for cross-maps, inference, fast full-text search, autocompletion, compositional grammar and the expression constraint language.

clojure lmdb health healthcare drugs lucene snomed icd-10 terminology diagnoses snomed-ct medications terminology-server

UpdatedFeb 26, 2025
Clojure

IBM /nlc-icd10-classifier

Star118

A simple web app that shows how Watson's Natural Language Classifier (NLC) can classify ICD-10 code. The app is written in Python using the Flask framework and leverages the Watson Developer Cloud Python SDK

classifier watson icd-10 ibm-cloud ibmcode nlc call-for-code watson-python-sdk

UpdatedMay 1, 2023
Python

suamin /ICD-BERT

Star74

ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)

icd-10 multi-label-classification bert clef

UpdatedMar 12, 2023
Python

StefanoTrv /simple_icd_10_CM

Star64

A simple python library for ICD-10-CM codes

python icd-10 icd10 icd icd-codes icd-10-cm icd-10-clinical-modification icd10cm

UpdatedJan 4, 2025
Python

spiros /chronological-map-phenotypes

Star48

Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.

epidemiology icd-10 phenotype electronic-health-record health-informatics read-code

UpdatedJun 28, 2024

StefanoTrv /simple_icd_10

Star39

A simple python library for ICD-10 codes

python icd-10 icd10 icd icd-codes

UpdatedJan 28, 2025
Python

spiros /phemap

Star34

Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records

icd-10 electronic-health-records uk-biobank phecode clinical-terminologies

UpdatedDec 27, 2022
Python

ropensci /coder

Star22

Classification of Cases into Deterministic Categories

package r classification rstats icd-10 r-package

UpdatedMar 14, 2023
TeX

NCBI-Hackathons /Design-of-ICD-9-to-10-conversion-function-for-the-R-package-icd

Star20

Develop a function to be incorporated into the R package 'icd' that will convert International Classification of Diseases codes from Ninth to Tenth revisions

cran icd-10 diagnosis icd-9 comorbidity comorbidities icd icd-10-cm womenled-nih-2019

UpdatedFeb 13, 2020
R

dot-base /icd-10-api

Star19

Rest API to search the 10th revision of the International Statistical Classification of Diseases Database.

rest-api fhir icd-10 nodejs-server

UpdatedNov 4, 2024
TypeScript

prkskrs /icd-10-Version

Star17

I have scraped International Statistical Classification of Diseases and Related Health Problems 10th Revision websites's data. It has all the diseases and health problems. I have also attached csv of scraped data which contains two column "Ids" and "Description".

python selenium webscraper health scrapy disease beautifulsoup icd-10 who icd-9 webscrapping icd webcrawling icd-10-cm icdar2021

UpdatedOct 10, 2022
Jupyter Notebook

JuliaHealth /ICD_GEMs.jl

Star17

ICD_GEMs.jl is a Julia package that allows to translate ICD-9 codes in ICD-10 and viceversa via the General Equivalence Mappings (GEMs) of the International Classification of Diseases (ICD).

data julia julia-language public-health epidemiology icd-10 who cdc health-data julia-package clinical-research icd-9 clinical-data icd-codes icd-10-cm mortality-data death-certificates

UpdatedDec 23, 2022
Julia

AsianZeus /Clinical-ICD10-Code-Prediction

Star16

This repository includes API to get ICD-10 codes from descriptions. The Model is a transformer based on BERT. The embeddings are being finetuned based on the following paper:https://arxiv.org/abs/1904.03323 .

icd-10 medical-data clinical-bert

UpdatedJun 29, 2022
Python

wenjie2wang /touch

Star13

Tools of Utilization and Cost in Healthcare

r healthcare icd-10 crosswalk icd-9 ahrq comorbidity

UpdatedJul 8, 2022
R

wardle /codelists

Star13

Generate code lists using an expressive combination of SNOMED ECL, ICD-10 and ATC codes

drugs atc snomed icd-10 diagnoses

UpdatedMay 1, 2024
Clojure

nlpie-research /umls-to-snomed-icd10-mapper

Star12

UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT or ICD-10 codes using the UMLS Metathesaurus. Supports exact match, broad relations, and parent-child hierarchy mapping methods.

converter icd-10 umls snomed-ct umls-to-snomed umls-to-icd