genome-browser
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JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, seehttps://github.com/GMOD/jbrowse-components.
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Mar 19, 2025 - JavaScript
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
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Oct 12, 2023 - Python
Genome browser and variant annotation
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Mar 26, 2025 - C++
Ultrafast Sample Placement on Existing Trees
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Feb 27, 2025 - C++
Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
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Mar 12, 2025 - Nextflow
SGS, is a user-friendly, collaborative and versatile browser for visualizing single-cell and spatial multiomics data.
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Mar 4, 2025 - JavaScript
Modular Multi-scale Integrated Genome Graph Browser
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Nov 2, 2024 - TypeScript
WashU Epigenome Browser
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Mar 18, 2025 - JavaScript
CGView.js creates interactive circular and linear genome maps.
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Mar 24, 2025 - JavaScript
Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
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Dec 23, 2019 - R
A python package for showing JBrowse views
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Jan 3, 2024 - Python
A Snakemake workflow and MrBiomics module for easy visualization of genome browser tracks of aligned BAM files (e.g., RNA-seq, ATAC-seq, scRNA-seq, ...) powered by the wrapper gtracks for the package pyGenomeTracks, and IGV-reports.
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Dec 20, 2024 - Python
Interactive visulizations for track-based genomic data in R
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Sep 9, 2024 - R
A collaborative notebook for genes and genomes
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Mar 24, 2025 - JavaScript
Tools for analyzing and comparing SARS-CoV-2 phylogenies
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Nov 21, 2020 - C++
Specifications and implementation of the TrackHub registry
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Feb 2, 2023 - Perl
Simple and fast html5 canvas based genome browser
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Jan 5, 2018 - JavaScript
A web app for viewing plasmid maps & genomes, and simulating PCR and Gibson assembly
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Mar 14, 2020 - TypeScript
A pipeline for the integration of DNA methylation and hydroxymethylation data
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Sep 19, 2017 - R
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