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#

compchem

Here are 31 public repositories matching this topic...

avogadrolibs

Avogadro libraries provide 3D rendering, visualization, analysis and data processing useful in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

  • UpdatedMar 16, 2025
  • C++

Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

  • UpdatedMar 16, 2025
  • C++

Library for reading and writing chemistry files

  • UpdatedMar 10, 2025
  • C++
GoodVibes

Calculate quasi-harmonic free energies from Gaussian output files with temperature and other corrections

  • UpdatedSep 5, 2024
  • Python
usearch-molecules

Searching for structural similarities across billions of molecules in milliseconds

  • UpdatedMar 25, 2024
  • Python
DockM8

All in one Structure-Based Virtual Screening workflow based on the concept of consensus docking.

  • UpdatedFeb 3, 2025
  • Jupyter Notebook

Pyssian is an object oriented library for parsing Gaussian logfiles and input files which aims to facilitate the everyday scripting of computational chemists using Gaussian.

  • UpdatedFeb 4, 2025
  • Python
DashMD

Real time monitoring and visualization of Amber MD simulations

  • UpdatedFeb 6, 2020
  • Python

Documentation and development website for Avogadro2

  • UpdatedJan 22, 2025
  • Python

Python input file generators for Avogadro 2

  • UpdatedJan 21, 2025
  • Python
Fragment-hit-follow-up-chemistry

A collection of notebooks and scripts for the prediction of follow-up compounds in

  • UpdatedDec 9, 2024
  • Jupyter Notebook

A set of tools developed with pyssian (https://github.com/maserasgroup-repo/pyssian) to automate some tasks related with Gaussian files.

  • UpdatedDec 7, 2021
  • Python

Gaussian software job automation. But can be modified for other computational softwares also.

  • UpdatedJan 4, 2024
  • Shell
PTEROSOR

ERC PTEROSOR website

  • UpdatedMar 4, 2025
  • HTML
plugin-cookbook

Chef Mike's Nanome Plugin Cookbook

  • UpdatedFeb 16, 2024
  • Jupyter Notebook

pip install analoguesplit

  • UpdatedNov 3, 2024
  • Jupyter Notebook

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