Scorecard Development in python, 评分卡

• UpdatedAug 9, 2024
• Python

Optimal binning: monotonic binning with constraints. Support batch & stream optimal binning. Scorecard modelling and counterfactual explanations.

• UpdatedMar 5, 2025
• Python

Assembly and binning of metagenomes

• UpdatedMar 13, 2025
• Nextflow

Scorecard Development in R, 评分卡

• UpdatedApr 13, 2024
• R

Find nearby 3D objects in constant time O(1).

• UpdatedJan 6, 2023
• JavaScript

✨🧬 Refined binning of metagenomic contigs using assembly graphs

• UpdatedMar 6, 2025
• Python

A hybrid assembly and MAG recovery pipeline (and more!)

• UpdatedMar 18, 2025
• Python

🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs

• UpdatedSep 26, 2024
• Python

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

• UpdatedMar 16, 2025
• C++

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes

• UpdatedJan 24, 2025
• Python

An algorithm for creating user configurable, variable-precision sliding windows of time. Useful for binning time values in large collections of data.

• UpdatedNov 3, 2022
• C#

pure Julia package for optimal histogram binning, based on piecewise constant model.

• UpdatedNov 18, 2022
• Julia

A Community Tool for Transiting Exoplanet Science with the JWST & HST

• UpdatedSep 26, 2024
• Jupyter Notebook

☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

• UpdatedMar 6, 2025
• Python

BinaRena: Interactive Visualization and Binning of Metagenomic Contigs

• UpdatedAug 22, 2024
• JavaScript

Improving genome bins through the combination of different binning programs

• UpdatedJan 30, 2023
• Python

AMBER: Assessment of Metagenome BinnERs

• UpdatedJan 14, 2025
• Python

Statistical standard error estimation tools for correlated data

• UpdatedJul 25, 2024
• Julia

Bayesian histograms for estimation of binary rare event rates, with fully automated bin pruning 📊

• UpdatedOct 14, 2021
• Jupyter Notebook

Repository of our application for human-augmented binning

• UpdatedApr 26, 2021
• Java