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This repository was archived by the owner on Nov 29, 2021. It is now read-only.

Snakemake workflow designed to annotate VCF files withe SnpEff / SniSift

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tdayris-perso/vcf-annotate-snpeff-snpsift

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This is theSnakemake workflow for VCF annotaion, powered bySnpEff andSnpSift for annotation, usingdbSNFP,MSigDb andGWAS Catalog databases. VCF statistics are aggregated byMultiQC.

Each tool and databases belong to their authors.

See [wiki] for more information.

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Snakemake workflow designed to annotate VCF files withe SnpEff / SniSift

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