Refinery Platform

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refinery-platformrefinery-platformPublic
The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data rep…
Python 104 24
visualization-toolsvisualization-toolsPublic
Registry for Visualization Tool Annotations that are compatible with Refinery (https://github.com/refinery-platform/refinery-platform)
Python 2 1
django_docker_enginedjango_docker_enginePublic
Django app that manages the creation of, and proxies requests to, Docker containers.
Python 6 2

Repositories

Showing 10 of 37 repositories

refinery-platform Public
The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and …
refinery-platform/refinery-platform’s past year of commit activity
Python 104 24 299 34 UpdatedJan 11, 2023
dataframer Public
Tries to load any file into a pandas DataFrame, with a minimum of configuration, and a focus on bioinformatics
refinery-platform/dataframer’s past year of commit activity
Python0MIT0 2 2 UpdatedDec 26, 2022
django_docker_engine Public
Django app that manages the creation of, and proxies requests to, Docker containers.
refinery-platform/django_docker_engine’s past year of commit activity
Python 6MIT 2 47 2 UpdatedDec 26, 2022
heatmap-scatter-dash Public
Interactive visualizations for differential expression
refinery-platform/heatmap-scatter-dash’s past year of commit activity
Python 25MIT 1 41 8 UpdatedDec 8, 2022
lineup-refinery-docker Public
Builds a Refinery visualization Docker image for Lineup
refinery-platform/lineup-refinery-docker’s past year of commit activity
Python0MIT0 9 0 UpdatedFeb 18, 2022
refinery-higlass-docker Public
"Refinery-ified" flavor of the higlass-docker (https://github.com/hms-dbmi/higlass-docker/) project
refinery-platform/refinery-higlass-docker’s past year of commit activity
Python0MIT0 5 0 UpdatedFeb 18, 2022
solr-synonyms-analyzer Public
Solr query parser plugin that performs proper query-time synonym expansion.
refinery-platform/solr-synonyms-analyzer’s past year of commit activity
Java00 0 2 UpdatedMay 12, 2021
kompatible Public
Python wrapper for Kubernetes which matches the interface of Docker
refinery-platform/kompatible’s past year of commit activity
Python0MIT0 1 1 UpdatedMar 25, 2021
visualization-tools Public
Registry for Visualization Tool Annotations that are compatible with Refinery (https://github.com/refinery-platform/refinery-platform)
refinery-platform/visualization-tools’s past year of commit activity
Python 2MIT 1 3 0 UpdatedNov 19, 2019
docker_igv_js Public
A Docker container to wrap IGV.js
refinery-platform/docker_igv_js’s past year of commit activity
Python0MIT 1 11 2 UpdatedNov 19, 2019