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@ding-lab

Li Ding's Lab

Li Ding's Lab at the Washington University School of Medicine

Popular repositoriesLoading

  1. msisensormsisensorPublic archive

    microsatellite instability detection using tumor only or paired tumor-normal data

    C++ 129 55

  2. CharGerCharGerPublic

    Characterization of Germline variants

    Python 98 37

  3. MuSiC2MuSiC2Public

    identifying mutational significance in cancer genomes

    Perl 61 20

  4. hotspot3dhotspot3dPublic

    3D hotspot mutation proximity analysis tool

    Perl 47 26

  5. PanCanAtlasGermlinePanCanAtlasGermlinePublic

    R 43 14

  6. GenomeVIPGenomeVIPPublic

    PHP 20 5

Repositories

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Showing 10 of 137 repositories
  • spatial_driver_co-detection_paper Public

    Code for spatial driver co-detection paper

    ding-lab/spatial_driver_co-detection_paper’s past year of commit activity
    R00 0 0 UpdatedMar 19, 2025
  • morph Public
    ding-lab/morph’s past year of commit activity
    Python 5MIT0 1 0 UpdatedMar 17, 2025
  • FSAudit Public

    Filesystem audit visualization

    ding-lab/FSAudit’s past year of commit activity
    Shell00 0 0 UpdatedMar 14, 2025
  • ding-lab/normal_mouse_kidney_scripts’s past year of commit activity
    R00 0 0 UpdatedMar 12, 2025
  • importGDC Public

    Automated download of CPTAC3 data from GDC

    ding-lab/importGDC’s past year of commit activity
    Shell 20 0 0 UpdatedFeb 27, 2025
  • GDC.case.discover Public

    Obtain submitted reads and clinical info associated with CPTAC3 cases

    ding-lab/GDC.case.discover’s past year of commit activity
    Shell 1GPL-3.0 2 0 0 UpdatedFeb 27, 2025
  • somaticwrapper Public

    Detect somatic variants from tumor and normal WGS/WXS data

    ding-lab/somaticwrapper’s past year of commit activity
    Perl 15AGPL-3.0 9 0 0 UpdatedFeb 26, 2025
  • mushroom Public

    A computational tool for identification of 3D multi-modal spatial neighborhoods

    ding-lab/mushroom’s past year of commit activity
    Jupyter Notebook 10MIT 1 1 0 UpdatedFeb 10, 2025
  • VirusScan Public

    VirusScan Pipeline

    ding-lab/VirusScan’s past year of commit activity
    Perl 11 7 0 0 UpdatedFeb 4, 2025
  • ST_subclone_publication Public

    Code for spatial subclone paper

    ding-lab/ST_subclone_publication’s past year of commit activity
    R 10 4 2 0 UpdatedJan 23, 2025

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