Instrumenting Python applications with EDOT SDKs on Kubernetes
Serverless ObservabilityStackEDOT Python
Learn how to instrument Python applications on Kubernetes using the OpenTelemetry Operator, the Elastic Distribution of OpenTelemetry (EDOT) Collector, and the EDOT Python SDK.
- For general knowledge about the EDOT Python SDK, refer to theEDOT Java Intro page.
- For Python auto-instrumentation specifics, refer toOpenTelemetry Operator Python auto-instrumentation.
- To manually instrument your Python application code (by customizing spans and metrics), refer toEDOT Python manual instrumentation.
- For general information about instrumenting applications on Kubernetes, refer toinstrumenting applications on Kubernetes.
The following environments and configurations are supported:
- EDOT Python container image supports
glibcandmuslbased auto-instrumentation for Python 3.12. muslbased containers instrumentation requires anextra annotation and operator v0.113.0+.- To turn on logs auto-instrumentation, refer toauto-instrument python logs.
- To turn on specific instrumentation libraries, refer toexcluding auto-instrumentation.
- For a full list of configuration options, refer toPython specific configuration.
- For Python specific limitations when using the OpenTelemetry operator, refer toPython-specific topics.
Following this example, you can learn how to:
- Turn on auto-instrumentation of a Python application using one of the following supported methods:
- Adding an annotation to the deployment Pods.
- Adding an annotation to the namespace.
- Verify that auto-instrumentation libraries are injected and configured correctly.
- Confirm data is flowing toKibana Observability.
For this example, we assume the application you're instrumenting is a deployment namedpython-app running in thepython-ns namespace.
Ensure you have successfullyinstalled the OpenTelemetry Operator, and confirm that the following
Instrumentationobject exists in the system:$ kubectl get instrumentation -n opentelemetry-operator-systemNAME AGE ENDPOINTelastic-instrumentation 107s http://opentelemetry-kube-stack-daemon-collector.opentelemetry-operator-system.svc.cluster.local:4318NoteIf your
Instrumentationobject has a different name or is created in a different namespace, you will have to adapt the annotation value in the next step.Turn on auto-instrumentation of the Python application using one of the following methods:
Edit your application workload definition and include the annotation under
spec.template.metadata.annotations:spec:# ...template: metadata: labels: app: python-app annotations: instrumentation.opentelemetry.io/inject-python: opentelemetry-operator-system/elastic-instrumentation# ...Alternatively, add the annotation at namespace level to apply auto-instrumentation in all Pods of the namespace:
kubectl annotate namespace python-ns instrumentation.opentelemetry.io/inject-python=opentelemetry-operator-system/elastic-instrumentation
Restart the application:
After the annotation has been set, restart the application to create new Pods and inject the instrumentation libraries:
bash kubectl rollout restart deployment python-app -n python-nsVerify theauto-instrumentation resources are injected in the Pod:
Run a
kubectl describeof one of your application pods and check:There should be an init container named
opentelemetry-auto-instrumentation-pythonin the Pod:$ kubectl describe pod python-app-8d84c47b8-8h5z2 -n python-ns......Init Containers:opentelemetry-auto-instrumentation-python: Container ID: containerd://fdc86b3191e34ef5ec872853b14a950d0af1e36b0bc207f3d59bd50dd3caafe9 Image: docker.elastic.co/observability/elastic-otel-python:0.3.0 Image ID: docker.elastic.co/observability/elastic-otel-python@sha256:de7b5cce7514a10081a00820a05097931190567ec6e18a384ff7c148bad0695e Port: <none> Host Port: <none> Command: cp -r /autoinstrumentation/. /otel-auto-instrumentation-python State: Terminated Reason: Completed...The main container has new environment variables, including
PYTHONPATH:...Containers:python-app:... Environment:... PYTHONPATH: /otel-auto-instrumentation-python/opentelemetry/instrumentation/auto_instrumentation:/otel-auto-instrumentation-python OTEL_EXPORTER_OTLP_PROTOCOL: http/protobuf OTEL_TRACES_EXPORTER: otlp OTEL_METRICS_EXPORTER: otlp OTEL_SERVICE_NAME: python-app OTEL_EXPORTER_OTLP_ENDPOINT: http://opentelemetry-kube-stack-daemon-collector.opentelemetry-operator-system.svc.cluster.local:4318...The Pod has an
EmptyDirvolume namedopentelemetry-auto-instrumentation-pythonmounted in both the main and the init containers in path/otel-auto-instrumentation-python:Init Containers:opentelemetry-auto-instrumentation-python:... Mounts: /otel-auto-instrumentation-python from opentelemetry-auto-instrumentation-python (rw)Containers:python-app:... Mounts: /otel-auto-instrumentation-python from opentelemetry-auto-instrumentation-python (rw)...Volumes:...opentelemetry-auto-instrumentation-python: Type: EmptyDir (a temporary directory that shares a pod's lifetime)
Make sure the environment variable
OTEL_EXPORTER_OTLP_ENDPOINTpoints to a valid endpoint and there's network communication between the Pod and the endpoint.Confirm data is flowing toKibana:
OpenObservability →Applications →Service inventory, and determine if:
- The application appears in the list of services.
- The application shows transactions and metrics.
- Ifpython logs instrumentation is enabled, the application logs should appear in the Logs tab.
For application container logs, openKibana Discover and filter for your Pods' logs. In the provided example, we could filter for them with either of the following:
k8s.deployment.name: "python-app"(adapt the query filter to your use case)k8s.pod.name: python-app*(adapt the query filter to your use case)
Note that the container logs are not provided by the instrumentation library, but by the DaemonSet collector deployed as part of theoperator installation.
Refer totroubleshoot auto-instrumentation for further analysis.