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PDBsum entry 1ybo

proteinligandsProtein-protein interface(s)links
Structural protein

 

 

 

 

 
JSmolPyMol 
163 a.a.*
THR-ASN-GLU-PHE-
TYR-ALA
GLU-PHE-TYR-ALA
 ×190
* Residue conservation analysis
PDB id:
Name:
Title: Crystal structure of the pdz tandem of human syntenin with syndecan peptide
Structure: Syntenin 1. Chain: a, b. Synonym: syndecan binding protein 1, melanoma differentiation associated protein-9, mda-9, scaffold protein pbp1, pro-tgf-alpha cytoplasmic domain-interacting protein 18, tacip18. Engineered: yes. Syndecan-4. Chain: c, d. Synonym: amphiglycan, synd4, ryudocan core protein.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: sdcbp, mda9, sycl. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693. Synthetic: yes. Other_details: synthesized peptide cooresponding to thE C-terminus of syndecan
Biol. unit: Tetramer (fromPQS)
Resolution:
2.30Å    R-factor:   0.193    R-free:   0.273
Authors: J.Grembecka,D.R.Cooper,T.Cierpicki,B.S.Kang,Y.Devedjiev,Z.Derewenda
Key ref:
J.Grembeckaet al. (2006). The binding of the PDZ tandem of syntenin to target proteins.Biochemistry,45, 3674-3683.
Date:
21-Dec-04    Release date:   10-Jan-06    
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam ArchSchema?
 (SDCB1_HUMAN) -  Syntenin-1 from Homo sapiens

 

 
DOI no: 10.1021/bi052225yBiochemistry45:3674-3683 (2006)
PubMed id: 16533050  
 
 
 
  ABSTRACT 
 
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2byg2fcf2fne2gzv2he22he42i1n2iwn2iwo2iwp2iwq
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2i042i0i2i0l
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The most recent references are shown first. Citation data come partly fromCiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.

 

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