PDBe›3l81
X-ray diffraction
1.6Å resolution
Crystal structure of adaptor protein complex 4 (AP-4) mu4 subunit C-terminal domain, in complex with a sorting peptide from the amyloid precursor protein (APP)
Released:
Source organism:Homo sapiens
Function and BiologyDetails
Biochemical function:
- not assigned
Biological process:
Cellular component:
Structure analysisDetails
Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126146 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
AP-4 complex subunit mu-1Chain: A
Molecule details ›
Chain: A
Length: 301 amino acids
Theoretical weight: 33.11 KDa
Source organism:Homo sapiens
Expression system:Escherichia coli
UniProt:
Sequence domains:Adaptor complexes medium subunit family
Structure domains:Mu homology domain, subdomain B
Length: 301 amino acids
Theoretical weight: 33.11 KDa
Source organism:Homo sapiens
Expression system:Escherichia coli
UniProt:
- Canonical:
O00189 (Residues: 160-453; Coverage: 65%)
Sequence domains:Adaptor complexes medium subunit family
Structure domains:Mu homology domain, subdomain B
C31Chain: B
Molecule details ›
Chain: B
Length: 7 amino acids
Theoretical weight: 963 Da
Source organism:Homo sapiens
Expression system: Not provided
UniProt:
Length: 7 amino acids
Theoretical weight: 963 Da
Source organism:Homo sapiens
Expression system: Not provided
UniProt:
- Canonical:
P05067 (Residues: 761-767; Coverage: 1%)
Ligands and Environments
1 bound ligand:
No modified residues
Experiments and ValidationDetails
X-ray source:APS BEAMLINE 23-ID-D, APS BEAMLINE 22-ID
Spacegroup:P21
Unit cell:
a: 46.672Å b: 56.91Å c: 60.664Å
α: 90° β: 106.53° γ: 90°
R-values:
RR workR free
0.209 0.207 0.252
Expression systems:
- Escherichia coli
- Not provided
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Archive mmCIF file
Updated mmCIF file
PDB file
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PDBML
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Structure Factors
EDS map
EDS difference map
Assembly composition XML
Assembly 1 (mmCIF; gz)
Assembly 1 (atom only; mmCIF)
FASTA (Entry)
SIFTS XML file with residue-level mappings
Summary report (PDF)
Full report (PDF)
Percentile plot (PNG)
Percentile plot (SVG)
Validation data (XML)
Updated mmCIF file
PDB file
PDB header
PDB file (gz)
PDBML
PDBML (ATOM lines)
PDBML (no atoms)
Structure Factors
EDS map
EDS difference map
Assembly composition XML
Assembly 1 (mmCIF; gz)
Assembly 1 (atom only; mmCIF)
FASTA (Entry)
SIFTS XML file with residue-level mappings
Summary report (PDF)
Full report (PDF)
Percentile plot (PNG)
Percentile plot (SVG)
Validation data (XML)
Citations
42 review citations
11 mentions without citation
PDB-REDO
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