muscData

This is thereleased version of muscData; for the devel version, seemuscData.

Multi-sample multi-group scRNA-seq data

Bioconductor version: Release (3.22)

Data package containing a collection of multi-sample multi-group scRNA-seq datasets in SingleCellExperiment Bioconductor object format.

Author: Helena L. Crowell [aut, cre]

Maintainer: Helena L. Crowell <helena.crowell at uzh.ch>

Citation (from within R, entercitation("muscData")):

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("muscData")

For older versions of R, please refer to the appropriateBioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("muscData")

Multi-sample multi-group scRNA-seq data	HTML	R Script
Reference Manual	PDF
LICENSE	Text

biocViews	ExperimentData,ExperimentHub,ExpressionData,GEO,Homo_sapiens_Data,ImmunoOncologyData,SingleCellData
Version	1.24.0
License	MIT + fileLICENSE
Depends	R (>= 3.6),ExperimentHub,SingleCellExperiment
Imports	utils
System Requirements
URL	https://github.com/HelenaLC/muscData
Bug Reports	https://github.com/HelenaLC/muscData/issues

Suggests	BiocStyle,dplyr,DropletUtils,knitr,GEOquery,Matrix,matrixStats, methods,muscat,rmarkdown,R.utils,readxl,scater,scds,Seurat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	dreamlet,glmGamPoi
Links To Me
Build Report	Build Report

FollowInstallation instructions to use this package in your R session.

Source Package	muscData_1.24.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/muscData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/muscData
Package Short Url	https://bioconductor.org/packages/muscData/
Package Downloads Report	Download Stats