TabulaMurisData

This is thereleased version of TabulaMurisData; for the devel version, seeTabulaMurisData.

10x And SmartSeq2 Data From The Tabula Muris Consortium

DOI: 10.18129/B9.bioc.TabulaMurisData

Bioconductor version: Release (3.22)

Access to processed 10x (droplet) and SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data from the Tabula Muris consortium (http://tabula-muris.ds.czbiohub.org/).

Author: Charlotte Soneson [aut, cre] ORCID: 0000-0003-3833-2169

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, entercitation("TabulaMurisData")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("TabulaMurisData")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TabulaMurisData")

Tabula Muris data	HTML	R Script
Reference Manual	PDF
NEWS	Text
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData,RNASeqData,SingleCellData
Version	1.28.0
License	MIT + fileLICENSE
Depends	R (>= 3.5)
Imports	ExperimentHub, utils
System Requirements
URL

Suggests	knitr,rmarkdown,BiocStyle,SingleCellExperiment,scran,scater,iSEE,testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source Package	TabulaMurisData_1.28.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/TabulaMurisData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/TabulaMurisData
Package Short Url	https://bioconductor.org/packages/TabulaMurisData/
Package Downloads Report	Download Stats

Movatterモバイル変換

Menu