rols
This is thereleased version of rols; for the devel version, seerols.
An R interface to the Ontology Lookup Service
Bioconductor version: Release (3.22)
The rols package is an interface to the Ontology Lookup Service (OLS) to access and query hundred of ontolgies directly from R.
Author: Laurent Gatto [aut, cre]
ORCID: 0000-0002-1520-2268, Tiage Chedraoui Silva [ctb], Andrew Clugston [ctb]
Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>
Citation (from within R, enter
citation("rols")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("rols")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rols")| An R interface to the Ontology Lookup Service | HTML | R Script |
| Reference Manual |
Details
| biocViews | Annotation,GO,ImmunoOncology,MassSpectrometry,Software |
| Version | 3.6.1 |
| In Bioconductor since | BioC 2.11 (R-2.15) (13 years) |
| License | GPL-2 |
| Depends | methods, R (>= 4.1.0) |
| Imports | httr2,jsonlite, utils,Biobase |
| System Requirements | |
| URL | http://lgatto.github.io/rols/ |
| Bug Reports | https://github.com/lgatto/rols/issues |
See More
| Suggests | GO.db,knitr (>= 1.1.0),BiocStyle(>= 2.5.19),testthat,lubridate,DT,rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | rols_3.6.1.tar.gz |
| Windows Binary (x86_64) | rols_3.5.0.zip |
| macOS Binary (x86_64) | rols_3.6.1.tgz |
| macOS Binary (arm64) | rols_3.6.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/rols |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rols |
| Bioc Package Browser | https://code.bioconductor.org/browse/rols/ |
| Package Short Url | https://bioconductor.org/packages/rols/ |
| Package Downloads Report | Download Stats |