mpra

This is thereleased version of mpra; for the devel version, seempra.

Analyze massively parallel reporter assays

Bioconductor version: Release (3.22)

Tools for data management, count preprocessing, and differential analysis in massively parallel report assays (MPRA).

Author: Leslie Myint [cre, aut], Kasper D. Hansen [aut]

Maintainer: Leslie Myint <leslie.myint at gmail.com>

Citation (from within R, entercitation("mpra")):

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("mpra")

For older versions of R, please refer to the appropriateBioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mpra")

biocViews	FunctionalGenomics,GeneRegulation,Sequencing,Software
Version	1.32.0
In Bioconductor since	BioC 3.6 (R-3.4) (8 years)
License	Artistic-2.0
Depends	R (>= 3.5.0), methods,BiocGenerics,SummarizedExperiment,limma
Imports	S4Vectors,scales, stats, graphics,statmod
System Requirements
URL	https://github.com/hansenlab/mpra
Bug Reports	https://github.com/hansenlab/mpra/issues

Suggests	BiocStyle,knitr,rmarkdown,RUnit
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

FollowInstallation instructions to use this package in your R session.

Source Package	mpra_1.32.0.tar.gz
Windows Binary (x86_64)	mpra_1.32.0.zip
macOS Binary (x86_64)	mpra_1.32.0.tgz
macOS Binary (arm64)	mpra_1.32.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/mpra
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/mpra
Bioc Package Browser	https://code.bioconductor.org/browse/mpra/
Package Short Url	https://bioconductor.org/packages/mpra/
Package Downloads Report	Download Stats