maser
This is thereleased version of maser; for the devel version, seemaser.
Mapping Alternative Splicing Events to pRoteins
Bioconductor version: Release (3.22)
This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.
Author: Diogo F.T. Veiga [aut, cre]
Maintainer: Diogo F.T. Veiga <diogof.veiga at gmail.com>
Citation (from within R, enter
citation("maser")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("maser")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("maser")| Introduction | HTML | R Script |
| Mapping protein features to splicing events | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | AlternativeSplicing,Software,Transcriptomics,Visualization |
| Version | 1.28.0 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| License | MIT + fileLICENSE |
| Depends | R (>= 3.5.0),ggplot2,GenomicRanges |
| Imports | dplyr,rtracklayer,reshape2,Gviz,DT,Seqinfo, stats, utils,IRanges, methods,BiocGenerics, parallel,data.table |
| System Requirements | |
| URL | https://github.com/DiogoVeiga/maser |
| Bug Reports | https://github.com/DiogoVeiga/maser/issues |
See More
| Suggests | testthat,knitr,rmarkdown,BiocStyle,AnnotationHub |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | maser_1.28.0.tar.gz |
| Windows Binary (x86_64) | maser_1.28.0.zip |
| macOS Binary (x86_64) | maser_1.28.0.tgz |
| macOS Binary (arm64) | maser_1.28.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/maser |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/maser |
| Bioc Package Browser | https://code.bioconductor.org/browse/maser/ |
| Package Short Url | https://bioconductor.org/packages/maser/ |
| Package Downloads Report | Download Stats |