infinityFlow

This is thereleased version of infinityFlow; for the devel version, seeinfinityFlow.

Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear Regressions

Bioconductor version: Release (3.22)

Pipeline to analyze and merge data files produced by BioLegend's LEGENDScreen or BD Human Cell Surface Marker Screening Panel (BD Lyoplates).

Author: Etienne Becht [cre, aut]

Maintainer: Etienne Becht <etienne.becht at protonmail.com>

Citation (from within R, entercitation("infinityFlow")):

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("infinityFlow")

For older versions of R, please refer to the appropriateBioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("infinityFlow")

Basic usage of the infinityFlow package	HTML	R Script
Training non default regression models	HTML	R Script
Reference Manual	PDF

biocViews	CellBasedAssays,FlowCytometry,Proteomics,SingleCell,Software
Version	1.20.0
In Bioconductor since	BioC 3.12 (R-4.0) (5 years)
License	GPL-3
Depends	R (>= 4.0.0),flowCore
Imports	stats, grDevices, utils, graphics,pbapply,matlab,png,raster, grid,uwot,gtools,Biobase,generics, parallel, methods,xgboost
System Requirements
URL

Suggests	knitr,rmarkdown,keras,tensorflow,glmnetUtils,e1071
Linking To
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Build Report	Build Report

FollowInstallation instructions to use this package in your R session.

Source Package	infinityFlow_1.20.0.tar.gz
Windows Binary (x86_64)	infinityFlow_1.20.0.zip
macOS Binary (x86_64)	infinityFlow_1.20.0.tgz
macOS Binary (arm64)	infinityFlow_1.20.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/infinityFlow
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/infinityFlow
Bioc Package Browser	https://code.bioconductor.org/browse/infinityFlow/
Package Short Url	https://bioconductor.org/packages/infinityFlow/
Package Downloads Report	Download Stats