iCheck
This is thereleased version of iCheck; for the devel version, seeiCheck.
QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data
Bioconductor version: Release (3.22)
QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.
Author: Weiliang Qiu [aut, cre], Brandon Guo [aut, ctb], Christopher Anderson [aut, ctb], Barbara Klanderman [aut, ctb], Vincent Carey [aut, ctb], Benjamin Raby [aut, ctb]
Maintainer: Weiliang Qiu <stwxq at channing.harvard.edu>
Citation (from within R, enter
citation("iCheck")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("iCheck")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("iCheck")| iCheck | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DNAMethylation,DifferentialExpression,GeneExpression,Microarray,OneChannel,Preprocessing,QualityControl,Software,TwoChannel |
| Version | 1.40.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (10 years) |
| License | GPL (>= 2) |
| Depends | R (>= 3.2.0),Biobase,lumi,gplots |
| Imports | stats, graphics,preprocessCore, grDevices,randomForest,affy,limma, parallel,GeneSelectMMD,rgl,MASS,lmtest,scatterplot3d, utils |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | iCheck_1.40.0.tar.gz |
| Windows Binary (x86_64) | iCheck_1.40.0.zip (64-bit only) |
| macOS Binary (x86_64) | iCheck_1.40.0.tgz |
| macOS Binary (arm64) | iCheck_1.40.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/iCheck |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/iCheck |
| Bioc Package Browser | https://code.bioconductor.org/browse/iCheck/ |
| Package Short Url | https://bioconductor.org/packages/iCheck/ |
| Package Downloads Report | Download Stats |