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geneplotter
This is thereleased version of geneplotter; for the devel version, seegeneplotter.
Graphics related functions for Bioconductor
Bioconductor version: Release (3.22)
Functions for plotting genomic data
Author: Robert Gentleman [aut], Rohit Satyam [ctb] (Converted geneplotter vignette from Sweave to RMarkdown / HTML.), Bioconductor Package Maintainer [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, enter
citation("geneplotter")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("geneplotter")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geneplotter")| How to Assemble a chromLocation Object | HTML | R Script |
| Visualization of Microarray Data | R Script | |
| Reference Manual | ||
| README | Text | |
| NEWS | Text |
Details
| biocViews | Software,Visualization |
| Version | 1.88.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 20.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10), methods,Biobase,BiocGenerics,lattice,annotate |
| Imports | AnnotationDbi, graphics, grDevices, grid,RColorBrewer, stats, utils |
| System Requirements | |
| URL |
See More
| Suggests | Rgraphviz,fibroEset,hgu95av2.db,hu6800.db,hgu133a.db,BiocStyle,knitr |
| Linking To | |
| Enhances | |
| Depends On Me | HD2013SGI,Hiiragi2013,maEndToEnd |
| Imports Me | biocGraph,DEXSeq,MethylSeekR |
| Suggests Me | biocGraph,Category,EnrichmentBrowser,GOstats,Single.mTEC.Transcriptomes |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | geneplotter_1.88.0.tar.gz |
| Windows Binary (x86_64) | geneplotter_1.88.0.zip |
| macOS Binary (x86_64) | geneplotter_1.88.0.tgz |
| macOS Binary (arm64) | geneplotter_1.88.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/geneplotter |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/geneplotter |
| Bioc Package Browser | https://code.bioconductor.org/browse/geneplotter/ |
| Package Short Url | https://bioconductor.org/packages/geneplotter/ |
| Package Downloads Report | Download Stats |