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Bioconductor 3.22 Released

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geneplotter

This is thereleased version of geneplotter; for the devel version, seegeneplotter.

Graphics related functions for Bioconductor

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DOI: 10.18129/B9.bioc.geneplotter


Bioconductor version: Release (3.22)

Functions for plotting genomic data

Author: Robert Gentleman [aut], Rohit Satyam [ctb] (Converted geneplotter vignette from Sweave to RMarkdown / HTML.), Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, entercitation("geneplotter")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("geneplotter")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneplotter")
How to Assemble a chromLocation ObjectHTMLR Script
Visualization of Microarray DataPDFR Script
Reference ManualPDF
READMEText
NEWSText

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsSoftware,Visualization
Version1.88.0
In Bioconductor sinceBioC 1.6 (R-2.1) or earlier (> 20.5 years)
LicenseArtistic-2.0
DependsR (>= 2.10), methods,Biobase,BiocGenerics,lattice,annotate
ImportsAnnotationDbi, graphics, grDevices, grid,RColorBrewer, stats, utils
System Requirements
URL
See More
SuggestsRgraphviz,fibroEset,hgu95av2.db,hu6800.db,hgu133a.db,BiocStyle,knitr
Linking To
Enhances
Depends On MeHD2013SGI,Hiiragi2013,maEndToEnd
Imports MebiocGraph,DEXSeq,MethylSeekR
Suggests MebiocGraph,Category,EnrichmentBrowser,GOstats,Single.mTEC.Transcriptomes
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source Packagegeneplotter_1.88.0.tar.gz
Windows Binary (x86_64) geneplotter_1.88.0.zip
macOS Binary (x86_64)geneplotter_1.88.0.tgz
macOS Binary (arm64)geneplotter_1.88.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/geneplotter
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/geneplotter
Bioc Package Browserhttps://code.bioconductor.org/browse/geneplotter/
Package Short Urlhttps://bioconductor.org/packages/geneplotter/
Package Downloads ReportDownload Stats

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