clstutils
This is thereleased version of clstutils; for the devel version, seeclstutils.
Tools for performing taxonomic assignment
Bioconductor version: Release (3.22)
Tools for performing taxonomic assignment based on phylogeny using pplacer and clst.
Author: Noah Hoffman
Maintainer: Noah Hoffman <ngh2 at uw.edu>
Citation (from within R, enter
citation("clstutils")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("clstutils")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("clstutils")| clst | R Script | |
| clstutils | R Script | |
| Reference Manual |
Details
| biocViews | Classification,QualityControl,Sequencing,Software,Visualization |
| Version | 1.58.0 |
| In Bioconductor since | BioC 2.8 (R-2.13) (14.5 years) |
| License | GPL-3 |
| Depends | R (>= 2.10),clst,rjson,ape |
| Imports | lattice,RSQLite |
| System Requirements | |
| URL |
See More
| Suggests | RUnit |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | clstutils_1.58.0.tar.gz |
| Windows Binary (x86_64) | clstutils_1.58.0.zip (64-bit only) |
| macOS Binary (x86_64) | clstutils_1.58.0.tgz |
| macOS Binary (arm64) | clstutils_1.58.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/clstutils |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/clstutils |
| Bioc Package Browser | https://code.bioconductor.org/browse/clstutils/ |
| Package Short Url | https://bioconductor.org/packages/clstutils/ |
| Package Downloads Report | Download Stats |