cleaver
This is thereleased version of cleaver; for the devel version, seecleaver.
Cleavage of Polypeptide Sequences
Bioconductor version: Release (3.22)
In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
Author: Sebastian Gibb [aut, cre]
ORCID: 0000-0001-7406-4443
Maintainer: Sebastian Gibb <mail at sebastiangibb.de>
Citation (from within R, enter
citation("cleaver")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("cleaver")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cleaver")| In-silico cleavage of polypeptides | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Proteomics,Software |
| Version | 1.48.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (12 years) |
| License | GPL (>= 3) |
| Depends | R (>= 3.0.0), methods,Biostrings(>= 1.29.8) |
| Imports | S4Vectors,IRanges |
| System Requirements | |
| URL | https://codeberg.org/sgibb/cleaver/ |
| Bug Reports | https://codeberg.org/sgibb/cleaver/issues/ |
See More
| Suggests | testthat (>= 0.8),knitr,BiocStyle(>= 0.0.14),rmarkdown,BRAIN,UniProt.ws(>= 2.36.5) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ProteoDisco |
| Suggests Me | RforProteomics |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | cleaver_1.48.0.tar.gz |
| Windows Binary (x86_64) | cleaver_1.48.0.zip (64-bit only) |
| macOS Binary (x86_64) | cleaver_1.48.0.tgz |
| macOS Binary (arm64) | cleaver_1.48.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/cleaver |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/cleaver |
| Bioc Package Browser | https://code.bioconductor.org/browse/cleaver/ |
| Package Short Url | https://bioconductor.org/packages/cleaver/ |
| Package Downloads Report | Download Stats |