TnT
This is thereleased version of TnT; for the devel version, seeTnT.
Interactive Visualization for Genomic Features
DOI: 10.18129/B9.bioc.TnT
Bioconductor version: Release (3.22)
A R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.
Author: Jialin Ma [cre, aut], Miguel Pignatelli [aut], Toby Hocking [aut]
Maintainer: Jialin Ma <marlin- at gmx.cn>
Citation (from within R, enter
citation("TnT")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("TnT")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TnT")| Introduction to TnT | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure,Software,Visualization |
| Version | 1.32.0 |
| In Bioconductor since | BioC 3.6 (R-3.4) (8 years) |
| License | AGPL-3 |
| Depends | R (>= 3.4),GenomicRanges |
| Imports | methods, stats, utils, grDevices,htmlwidgets,jsonlite,data.table,Biobase,GenomeInfoDb,IRanges,S4Vectors,knitr |
| System Requirements | |
| URL | https://github.com/Marlin-Na/TnT |
| Bug Reports | https://github.com/Marlin-Na/TnT/issues |
See More
| Suggests | GenomicFeatures,shiny,BiocManager,rmarkdown,testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | TnT_1.32.0.tar.gz |
| Windows Binary (x86_64) | TnT_1.32.0.zip |
| macOS Binary (x86_64) | TnT_1.32.0.tgz |
| macOS Binary (arm64) | TnT_1.32.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/TnT |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TnT |
| Bioc Package Browser | https://code.bioconductor.org/browse/TnT/ |
| Package Short Url | https://bioconductor.org/packages/TnT/ |
| Package Downloads Report | Download Stats |