MBQN
This is thereleased version of MBQN; for the devel version, seeMBQN.
Mean/Median-balanced quantile normalization
Bioconductor version: Release (3.22)
Modified quantile normalization for omics or other matrix-like data distorted in location and scale.
Author: Eva Brombacher [aut, cre]
ORCID: 0000-0002-5488-0985, Clemens Kreutz [aut, ctb] ORCID: 0000-0002-8796-5766, Ariane Schad [aut, ctb] ORCID: 0000-0002-1921-8902
Maintainer: Eva Brombacher <brombach at imbi.uni-freiburg.de>
Citation (from within R, enter
citation("MBQN")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("MBQN")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MBQN")| MBQN Package | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Normalization,Preprocessing,Proteomics,Software |
| Version | 2.22.0 |
| In Bioconductor since | BioC 3.10 (R-3.6) (6 years) |
| License | GPL-3 + fileLICENSE |
| Depends | R (>= 3.6) |
| Imports | stats, graphics, utils,limma(>= 3.30.13),SummarizedExperiment(>= 1.10.0),preprocessCore(>= 1.36.0),BiocFileCache,rappdirs,xml2,RCurl,ggplot2,PairedData,rmarkdown |
| System Requirements | |
| URL | https://github.com/arianeschad/mbqn |
| Bug Reports | https://github.com/arianeschad/MBQN/issues |
See More
| Suggests | knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | MBQN_2.22.0.tar.gz |
| Windows Binary (x86_64) | MBQN_2.22.0.zip |
| macOS Binary (x86_64) | MBQN_2.22.0.tgz |
| macOS Binary (arm64) | MBQN_2.22.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MBQN |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MBQN |
| Bioc Package Browser | https://code.bioconductor.org/browse/MBQN/ |
| Package Short Url | https://bioconductor.org/packages/MBQN/ |
| Package Downloads Report | Download Stats |