IVAS

This is thereleased version of IVAS; for the devel version, seeIVAS.

Identification of genetic Variants affecting Alternative Splicing

Bioconductor version: Release (3.22)

Identification of genetic variants affecting alternative splicing.

Author: Seonggyun Han, Sangsoo Kim

Maintainer: Seonggyun Han <hangost at ssu.ac.kr>

Citation (from within R, entercitation("IVAS")):

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("IVAS")

For older versions of R, please refer to the appropriateBioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IVAS")

IVAS : Identification of genetic Variants affecting Alternative Splicing	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	AlternativeSplicing,DifferentialExpression,DifferentialSplicing,GeneExpression,GeneRegulation,ImmunoOncology,RNASeq,Regression,SNP,Sequencing,Software,Transcription
Version	2.30.0
In Bioconductor since	BioC 3.1 (R-3.2) (10.5 years)
License	GPL-2
Depends	R (> 3.0.0),GenomicFeatures,ggplot2,Biobase
Imports	doParallel,lme4,BiocGenerics,GenomicRanges,IRanges,foreach,AnnotationDbi,S4Vectors,Seqinfo,ggfortify, grDevices, methods,Matrix,BiocParallel, utils, stats
System Requirements
URL

FollowInstallation instructions to use this package in your R session.

Source Package	IVAS_2.30.0.tar.gz
Windows Binary (x86_64)	IVAS_2.30.0.zip
macOS Binary (x86_64)	IVAS_2.30.0.tgz
macOS Binary (arm64)	IVAS_2.30.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/IVAS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/IVAS
Bioc Package Browser	https://code.bioconductor.org/browse/IVAS/
Package Short Url	https://bioconductor.org/packages/IVAS/
Package Downloads Report	Download Stats