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CONFESS

This is thereleased version of CONFESS; for the devel version, seeCONFESS.

Cell OrderiNg by FluorEScence Signal

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DOI: 10.18129/B9.bioc.CONFESS


Bioconductor version: Release (3.22)

Single Cell Fluidigm Spot Detector.

Author: Diana LOW and Efthimios MOTAKIS

Maintainer: Diana LOW <lowdiana at gmail.com>

Citation (from within R, entercitation("CONFESS")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("CONFESS")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CONFESS")
CONFESSPDFR Script
CONFESS WalkthroughHTMLR Script
Reference ManualPDF
NEWSText

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsCellBiology,Classification,Clustering,DataImport,GeneExpression,ImmunoOncology,QualityControl,RNASeq,Regression,Software,TimeCourse,Visualization
Version1.38.0
In Bioconductor sinceBioC 3.3 (R-3.3) (9.5 years)
LicenseGPL-2
DependsR (>= 3.3), grDevices, utils, stats, graphics
Importsmethods,changepoint,cluster,contrast,data.table (>= 1.9.7),ecp,EBImage,flexmix,flowCore,flowClust,flowMeans,flowMerge,flowPeaks,foreach,ggplot2, grid,limma,MASS,moments,outliers, parallel,plotrix,raster,readbitmap,reshape2,SamSPECTRAL,waveslim,wavethresh,zoo
System Requirements
URL
See More
SuggestsBiocStyle,knitr,rmarkdown,CONFESSdata
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackageCONFESS_1.38.0.tar.gz
Windows Binary (x86_64) CONFESS_1.38.0.zip (64-bit only)
macOS Binary (x86_64)CONFESS_1.38.0.tgz
macOS Binary (arm64)CONFESS_1.38.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/CONFESS
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/CONFESS
Bioc Package Browserhttps://code.bioconductor.org/browse/CONFESS/
Package Short Urlhttps://bioconductor.org/packages/CONFESS/
Package Downloads ReportDownload Stats

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