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CMA

This is thereleased version of CMA; for the devel version, seeCMA.

Synthesis of microarray-based classification

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DOI: 10.18129/B9.bioc.CMA


Bioconductor version: Release (3.22)

This package provides a comprehensive collection of various microarray-based classification algorithms both from Machine Learning and Statistics. Variable Selection, Hyperparameter tuning, Evaluation and Comparison can be performed combined or stepwise in a user-friendly environment.

Author: Martin Slawski <ms at cs.uni-sb.de>, Anne-Laure Boulesteix <boulesteix at ibe.med.uni-muenchen.de>, Christoph Bernau <bernau at ibe.med.uni-muenchen.de>.

Maintainer: Roman Hornung <hornung at ibe.med.uni-muenchen.de>

Citation (from within R, entercitation("CMA")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("CMA")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CMA")
CMA_vignette.pdfPDFR Script
Reference ManualPDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsClassification,DecisionTree,Software
Version1.68.0
In Bioconductor sinceBioC 2.3 (R-2.8) (17 years)
LicenseGPL (>= 2)
DependsR (>= 2.10), methods, stats,Biobase
Imports
System Requirements
URL
See More
SuggestsMASS,class,nnet,glmnet,e1071,randomForest,plsgenomics,gbm,mgcv,corpcor,limma,st,mvtnorm
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackageCMA_1.68.0.tar.gz
Windows Binary (x86_64) CMA_1.68.0.zip
macOS Binary (x86_64)CMA_1.68.0.tgz
macOS Binary (arm64)CMA_1.68.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/CMA
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/CMA
Bioc Package Browserhttps://code.bioconductor.org/browse/CMA/
Package Short Urlhttps://bioconductor.org/packages/CMA/
Package Downloads ReportDownload Stats

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