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BiocWorkflowTools
This is thereleased version of BiocWorkflowTools; for the devel version, seeBiocWorkflowTools.
Tools to aid the development of Bioconductor Workflow packages
Bioconductor version: Release (3.22)
Provides functions to ease the transition between Rmarkdown and LaTeX documents when authoring a Bioconductor Workflow.
Author: Mike Smith [aut, cre], Andrzej Oleś [aut]
Maintainer: Mike Smith <grimbough at gmail.com>
Citation (from within R, enter
citation("BiocWorkflowTools")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("BiocWorkflowTools")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocWorkflowTools")| Converting Rmarkdown to F1000Research LaTeX Format | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | ReportWriting,Software |
| Version | 1.36.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (9 years) |
| License | MIT + fileLICENSE |
| Depends | R (>= 3.4) |
| Imports | BiocStyle,bookdown,git2r,httr,knitr,rmarkdown,rstudioapi,stringr, tools, utils,usethis |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | RNAseq123 |
| Imports Me | |
| Suggests Me | CAGEWorkflow,recountWorkflow |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | BiocWorkflowTools_1.36.0.tar.gz |
| Windows Binary (x86_64) | BiocWorkflowTools_1.36.0.zip |
| macOS Binary (x86_64) | BiocWorkflowTools_1.36.0.tgz |
| macOS Binary (arm64) | BiocWorkflowTools_1.36.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocWorkflowTools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocWorkflowTools |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocWorkflowTools/ |
| Package Short Url | https://bioconductor.org/packages/BiocWorkflowTools/ |
| Package Downloads Report | Download Stats |