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BiocSklearn

This is thereleased version of BiocSklearn; for the devel version, seeBiocSklearn.

interface to python sklearn via Rstudio reticulate

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DOI: 10.18129/B9.bioc.BiocSklearn


Bioconductor version: Release (3.22)

This package provides interfaces to selected sklearn elements, and demonstrates fault tolerant use of python modules requiring extensive iteration.

Author: Vince Carey [cre, aut]

Maintainer: Vince Carey <stvjc at channing.harvard.edu>

Citation (from within R, entercitation("BiocSklearn")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("BiocSklearn")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocSklearn")
BiocSklearn overviewHTMLR Script
Reference ManualPDF
NEWSText

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsDimensionReduction,Infrastructure,Software,StatisticalMethod
Version1.32.0
In Bioconductor sinceBioC 3.6 (R-3.4) (8 years)
LicenseArtistic-2.0
DependsR (>= 4.0),reticulate, methods,SummarizedExperiment
Importsbasilisk
System Requirementspython (>= 2.7), sklearn, numpy, pandas, h5py
URL
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Suggeststestthat,HDF5Array,BiocStyle,rmarkdown,knitr
Linking To
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Depends On Me
Imports Me
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Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackageBiocSklearn_1.32.0.tar.gz
Windows Binary (x86_64) BiocSklearn_1.32.0.zip (64-bit only)
macOS Binary (x86_64)BiocSklearn_1.32.0.tgz
macOS Binary (arm64)BiocSklearn_1.32.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/BiocSklearn
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/BiocSklearn
Bioc Package Browserhttps://code.bioconductor.org/browse/BiocSklearn/
Package Short Urlhttps://bioconductor.org/packages/BiocSklearn/
Package Downloads ReportDownload Stats

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