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BiocPkgTools
This is thereleased version of BiocPkgTools; for the devel version, seeBiocPkgTools.
Collection of simple tools for learning about Bioconductor Packages
Bioconductor version: Release (3.22)
Bioconductor has a rich ecosystem of metadata around packages, usage, and build status. This package is a simple collection of functions to access that metadata from R. The goal is to expose metadata for data mining and value-added functionality such as package searching, text mining, and analytics on packages.
Author: Shian Su [aut, ctb], Lori Shepherd [ctb], Marcel Ramos [aut, ctb]
ORCID: 0000-0002-3242-0582, Felix G.M. Ernst [ctb], Jennifer Wokaty [ctb], Charlotte Soneson [ctb], Martin Morgan [ctb], Vince Carey [ctb], Sean Davis [aut, cre]
Maintainer: Sean Davis <seandavi at gmail.com>
citation("BiocPkgTools")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("BiocPkgTools")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocPkgTools")| Overview of BiocPkgTools | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Infrastructure,Software |
| Version | 1.27.12 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| License | MIT + fileLICENSE |
| Depends | htmlwidgets, R (>= 4.1.0) |
| Imports | BiocFileCache,BiocManager,biocViews,tibble, methods,rlang,stringr, stats,rvest,dplyr,xml2,readr,httr,httr2,htmltools,DT, tools, utils,igraph (>= 2.0.0),jsonlite,gh,RBGL,graph,curl,glue,lubridate,purrr,tidyr,yaml |
| System Requirements | mailsend-go |
| URL | https://github.com/seandavi/BiocPkgTools |
| Bug Reports | https://github.com/seandavi/BiocPkgTools/issues/new |
See More
| Suggests | BiocStyle,knitr,rmarkdown,testthat,tm,networkD3,visNetwork,clipr,blastula,kableExtra,DiagrammeR,SummarizedExperiment |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | biocViews, OSTA,rworkflows |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | BiocPkgTools_1.27.12.tar.gz |
| Windows Binary (x86_64) | BiocPkgTools_1.27.9.zip |
| macOS Binary (x86_64) | BiocPkgTools_1.27.12.tgz |
| macOS Binary (arm64) | BiocPkgTools_1.27.12.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocPkgTools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocPkgTools |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocPkgTools/ |
| Package Short Url | https://bioconductor.org/packages/BiocPkgTools/ |
| Package Downloads Report | Download Stats |