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BioCartaImage
This is thereleased version of BioCartaImage; for the devel version, seeBioCartaImage.
BioCarta Pathway Images
Bioconductor version: Release (3.22)
The core functionality of the package is to provide coordinates of genes on the BioCarta pathway images and to provide methods to add self-defined graphics to the genes of interest.
Author: Zuguang Gu [aut, cre]
ORCID: 0000-0002-7395-8709
Maintainer: Zuguang Gu <z.gu at dkfz.de>
Citation (from within R, enter
citation("BioCartaImage")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("BioCartaImage")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BioCartaImage")| Customize BioCarta Pathway Images | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | BioCarta,Pathways,Software,Visualization |
| Version | 1.8.0 |
| In Bioconductor since | BioC 3.18 (R-4.3) (2 years) |
| License | MIT + fileLICENSE |
| Depends | R (>= 4.3.0) |
| Imports | magick, grid, stats, grDevices, utils |
| System Requirements | |
| URL | https://github.com/jokergoo/BioCartaImage |
| Bug Reports | https://github.com/jokergoo/BioCartaImage/issues |
See More
| Suggests | testthat,knitr,BiocStyle,ragg |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | BioCartaImage_1.8.0.tar.gz |
| Windows Binary (x86_64) | BioCartaImage_1.8.0.zip (64-bit only) |
| macOS Binary (x86_64) | BioCartaImage_1.8.0.tgz |
| macOS Binary (arm64) | BioCartaImage_1.8.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BioCartaImage |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BioCartaImage |
| Bioc Package Browser | https://code.bioconductor.org/browse/BioCartaImage/ |
| Package Short Url | https://bioconductor.org/packages/BioCartaImage/ |
| Package Downloads Report | Download Stats |