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eoPredData

This is thereleased version of eoPredData; for the devel version, seeeoPredData.

ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile

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DOI: 10.18129/B9.bioc.eoPredData


Bioconductor version: Release (3.22)

Provides access to eoPred pretrained model hosted on ExperimentHub. Model was trained on placental DNA methylation preeclampsia samples using mixOmics splsda. There are two resources: 1. the model object, and 2. a testing data set used to demonstrate the function.

Author: Iciar Boyano [aut], Victor Yuan [aut, cre]

Maintainer: Victor Yuan <victor.2wy at gmail.com>

Citation (from within R, entercitation("eoPredData")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("eoPredData")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("eoPredData")
eoPredDataHTMLR Script
Reference ManualPDF
LICENSEText

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsExperimentData,ExperimentHub,GEO,Homo_sapiens_Data,MethylationArrayData,Tissue
Version1.4.0
LicenseMIT + fileLICENSE
DependsExperimentHub
Imports
System Requirements
URLhttps://github.com/wvictor14/eoPredData
Bug Reportshttps://github.com/wvictor14/eoPredData/issues
See More
SuggestsBiocStyle,knitr,rmarkdown,RefManageR,planet,mixOmics
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackageeoPredData_1.4.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/eoPredData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/eoPredData
Package Short Urlhttps://bioconductor.org/packages/eoPredData/
Package Downloads ReportDownload Stats

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