nucleR

This is thereleased version of nucleR; for the devel version, seenucleR.

Nucleosome positioning package for R

Bioconductor version: Release (3.22)

Nucleosome positioning for Tiling Arrays and NGS experiments.

Author: Oscar Flores, Ricard Illa

Maintainer: Alba Sala <alba.sala at irbbarcelona.org>

Citation (from within R, entercitation("nucleR")):

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("nucleR")

For older versions of R, please refer to the appropriateBioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("nucleR")

biocViews	ChIPSeq,Coverage,DataImport,Genetics,Microarray,NucleosomePositioning,QualityControl,Sequencing,Software
Version	2.42.0
In Bioconductor since	BioC 2.9 (R-2.14) (14 years)
License	LGPL (>= 3)
Depends	R (>= 3.5.0), methods
Imports	Biobase,BiocGenerics,Biostrings,Seqinfo,GenomicRanges,IRanges,Rsamtools,S4Vectors,ShortRead,dplyr,ggplot2,magrittr, parallel, stats, utils, grDevices
System Requirements
URL

Suggests	BiocStyle,knitr,rmarkdown,testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

FollowInstallation instructions to use this package in your R session.

Source Package	nucleR_2.42.0.tar.gz
Windows Binary (x86_64)	nucleR_2.42.0.zip
macOS Binary (x86_64)	nucleR_2.42.0.tgz
macOS Binary (arm64)	nucleR_2.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/nucleR
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/nucleR
Bioc Package Browser	https://code.bioconductor.org/browse/nucleR/
Package Short Url	https://bioconductor.org/packages/nucleR/
Package Downloads Report	Download Stats