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netresponse
This is thereleased version of netresponse; for the devel version, seenetresponse.
Functional Network Analysis
Bioconductor version: Release (3.22)
Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.
Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen
Maintainer: Leo Lahti <leo.lahti at iki.fi>
Citation (from within R, enter
citation("netresponse")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("netresponse")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("netresponse")| microbiome R package | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CellBiology,Clustering,DifferentialExpression,GeneExpression,Genetics,GraphAndNetwork,Microarray,Network,NetworkInference,Software,Transcription |
| Version | 1.70.0 |
| In Bioconductor since | BioC 2.7 (R-2.12) (15 years) |
| License | GPL (>=2) |
| Depends | R (>= 2.15.1),BiocStyle,Rgraphviz,rmarkdown, methods,minet,mclust,reshape2 |
| Imports | ggplot2,graph,igraph, parallel,plyr,qvalue,RColorBrewer |
| System Requirements | |
| URL | https://github.com/antagomir/netresponse |
| Bug Reports | https://github.com/antagomir/netresponse/issues |
See More
| Suggests | knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | netresponse_1.70.0.tar.gz |
| Windows Binary (x86_64) | netresponse_1.70.0.zip |
| macOS Binary (x86_64) | netresponse_1.70.0.tgz |
| macOS Binary (arm64) | netresponse_1.70.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/netresponse |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/netresponse |
| Bioc Package Browser | https://code.bioconductor.org/browse/netresponse/ |
| Package Short Url | https://bioconductor.org/packages/netresponse/ |
| Package Downloads Report | Download Stats |