made4
This is thereleased version of made4; for the devel version, seemade4.
Multivariate analysis of microarray data using ADE4
Bioconductor version: Release (3.22)
Multivariate data analysis and graphical display of microarray data. Functions include for supervised dimension reduction (between group analysis) and joint dimension reduction of 2 datasets (coinertia analysis). It contains functions that require R package ade4.
Author: Aedin Culhane
Maintainer: Aedin Culhane <Aedin at jimmy.harvard.edu>
citation("made4")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("made4")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("made4")| Authoring R Markdown vignettes | HTML | R Script |
| Reference Manual |
Details
| biocViews | Classification,Clustering,DimensionReduction,GeneExpression,Microarray,MultipleComparison,PrincipalComponent,Sequencing,Software,Transcriptomics |
| Version | 1.84.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 20.5 years) |
| License | Artistic-2.0 |
| Depends | RColorBrewer,gplots,scatterplot3d,Biobase,SummarizedExperiment |
| Imports | ade4 |
| System Requirements | |
| URL | http://www.hsph.harvard.edu/aedin-culhane/ |
See More
| Suggests | affy,BiocStyle,knitr,rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | omicade4 |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | made4_1.84.0.tar.gz |
| Windows Binary (x86_64) | made4_1.84.0.zip |
| macOS Binary (x86_64) | made4_1.84.0.tgz |
| macOS Binary (arm64) | made4_1.84.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/made4 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/made4 |
| Bioc Package Browser | https://code.bioconductor.org/browse/made4/ |
| Package Short Url | https://bioconductor.org/packages/made4/ |
| Package Downloads Report | Download Stats |