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epivizrData
This is thereleased version of epivizrData; for the devel version, seeepivizrData.
Data Management API for epiviz interactive visualization app
Bioconductor version: Release (3.22)
Serve data from Bioconductor Objects through a WebSocket connection.
Author: Hector Corrada Bravo [aut, cre], Florin Chelaru [aut]
Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>
Citation (from within R, enter
citation("epivizrData")):Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("epivizrData")For older versions of R, please refer to the appropriateBioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("epivizrData")| epivizrData Usage | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Infrastructure,Software,Visualization |
| Version | 1.38.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (9.5 years) |
| License | MIT + fileLICENSE |
| Depends | R (>= 3.4), methods,epivizrServer(>= 1.1.1),Biobase |
| Imports | S4Vectors,GenomicRanges(>= 1.61.1),SummarizedExperiment(>= 1.39.1),OrganismDbi,GenomicFeatures(>= 1.61.4),Seqinfo,IRanges,ensembldb(>= 2.33.1) |
| System Requirements | |
| URL | http://epiviz.github.io |
| Bug Reports | https://github.com/epiviz/epivizrData/issues |
See More
| Suggests | testthat,roxygen2,bumphunter,hgu133plus2.db,Mus.musculus,TxDb.Mmusculus.UCSC.mm10.knownGene,rjson,knitr,rmarkdown,BiocStyle,EnsDb.Mmusculus.v79,AnnotationHub,rtracklayer, utils,RMySQL,DBI,matrixStats |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | epivizr,epivizrChart,scTreeViz |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
FollowInstallation instructions to use this package in your R session.
| Source Package | epivizrData_1.38.0.tar.gz |
| Windows Binary (x86_64) | epivizrData_1.38.0.zip |
| macOS Binary (x86_64) | epivizrData_1.38.0.tgz |
| macOS Binary (arm64) | epivizrData_1.38.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/epivizrData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/epivizrData |
| Bioc Package Browser | https://code.bioconductor.org/browse/epivizrData/ |
| Package Short Url | https://bioconductor.org/packages/epivizrData/ |
| Package Downloads Report | Download Stats |