Rgraphviz

This is thereleased version of Rgraphviz; for the devel version, seeRgraphviz.

Provides plotting capabilities for R graph objects

DOI: 10.18129/B9.bioc.Rgraphviz

Bioconductor version: Release (3.22)

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

Author: Kasper Daniel Hansen [cre, aut], Jeff Gentry [aut], Li Long [aut], Robert Gentleman [aut], Seth Falcon [aut], Florian Hahne [aut], Deepayan Sarkar [aut]

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Citation (from within R, entercitation("Rgraphviz")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")BiocManager::install("Rgraphviz")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rgraphviz")

A New Interface to Plot Graphs Using Rgraphviz	PDF	R Script
How To Plot A Graph Using Rgraphviz	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GraphAndNetwork,Software,Visualization
Version	2.54.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 20.5 years)
License	EPL
Depends	R (>= 2.6.0), methods, utils,graph, grid
Imports	stats4, graphics, grDevices
System Requirements	optionally Graphviz (>= 2.16), USE_C17
URL

Suggests	RUnit,BiocGenerics,XML
Linking To
Enhances
Depends On Me	biocGraph,BioMVCClass,CellNOptR,MineICA,netresponse,paircompviz,pathRender,ROntoTools,SplicingGraphs,maEndToEnd,dlsem,gridGraphviz
Imports Me	apComplex,biocGraph,bnem,chimeraviz,CytoML,DEGraph,EnrichDO,EnrichmentBrowser,flowWorkspace,GeneNetworkBuilder,GOstats,hyperdraw,KEGGgraph,mirIntegrator,MIRit,mnem,OncoSimulR,ontoProc,paircompviz,pathview,qpgraph,TRONCO,abn,agena.ai,BCDAG,BiDAG,bnpa,bnRep,ceg,CePa,classGraph,cogmapr,graphpcor,ontologyPlot,SEMgraph,stablespec,WayFindR
Suggests Me	a4,altcdfenvs,annotate,Category,CNORfeeder,CNORfuzzy,DEGraph,flowCore,geneplotter,GlobalAncova,globaltest,GSEABase,MLP,NCIgraph,RBGL,rBiopaxParser,safe,SPIA,SRAdb,Streamer,topGO,ViSEAGO,vtpnet,NCIgraphData,SNAData,arulesViz,BayesNetBP,bnlearn,bnstruct,ChoR,CodeDepends,gbutils,GeneNet,HEMDAG,iTOP,kst,lava,loon,maGUI,micd,multiplex,netmeta,ParallelPC,pcalg,PCBN,pchc,pks,psych,relations,rEMM,rPref,rSpectral,SCCI,sisal,textplot,tm,topologyGSA,tpc,unifDAG,zenplots
Links To Me
Build Report	Build Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source Package	Rgraphviz_2.54.0.tar.gz
Windows Binary (x86_64)	Rgraphviz_2.53.0.zip
macOS Binary (x86_64)	Rgraphviz_2.54.0.tgz
macOS Binary (arm64)	Rgraphviz_2.54.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rgraphviz
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rgraphviz
Bioc Package Browser	https://code.bioconductor.org/browse/Rgraphviz/
Package Short Url	https://bioconductor.org/packages/Rgraphviz/
Package Downloads Report	Download Stats

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