| Suggests Me | ACE,ADAM,ADAMgui,ADImpute,AffiXcan,affycoretools,aggregateBioVar,AHMassBank,alabaster,alabaster.base,alabaster.bumpy,alabaster.files,alabaster.mae,alabaster.matrix,alabaster.ranges,alabaster.sce,alabaster.schemas,alabaster.se,alabaster.sfe,alabaster.spatial,alabaster.string,alabaster.vcf,ALDEx2,alevinQC,AllelicImbalance,AlpsNMR,AMARETTO,AMOUNTAIN,amplican,anansi,anglemania,animalcules,anndataR,annotate,AnnotationDbi,AnnotationFilter,AnnotationForge,AnnotationHub,AnnotationHubData,annotationTools,annotatr,AnVIL,AnVILAz,AnVILBase,AnVILBilling,AnVILGCP,AnVILPublish,AnVILWorkflow,APL,artMS,ASGSCA,ASICS,AssessORF,ASSIGN,assorthead,ATACseqQC,ATACseqTFEA,atena,atSNP,AUCell,autonomics,AWAggregator,awst,BaalChIP,bacon,bamsignals,BANDITS,Banksy,banocc,barbieQ,basecallQC,BASiCS,basilisk,basilisk.utils,batchCorr,batchelor,BatchQC,BatchSVG,bayNorm,baySeq,beachmat,beachmat.hdf5,beachmat.tiledb,BeadDataPackR,BEclear,bedbaser,beer,BERT,betaHMM,bettr,BG2,BgeeDB,bigmelon,BindingSiteFinder,bioassayR,Biobase,biobtreeR,Bioc.gff,bioCancer,BioCartaImage,BiocBaseUtils,BiocBook,BiocCheck,BiocFHIR,BiocFileCache,BiocHail,BiocHubsShiny,BiocIO,biocmake,BiocNeighbors,BioCor,BiocParallel,BiocPkgTools,biocroxytest,BiocSet,BiocSingular,BiocSklearn,biocthis,biocViews,biodb,biodbChebi,biomaRt,biomformat,BioNAR,BioNERO,biosigner,Biostrings,biotmle,biscuiteer,blacksheepr,blase,bluster,bnbc,bnem,BOBaFIT,borealis,breakpointR,BreastSubtypeR,brendaDb,BREW3R.r,BridgeDbR,BrowserViz,BSgenomeForge,bsseq,bugsigdbr,BUMHMM,BumpyMatrix,BUScorrect,BUSpaRse,BUSseq,CAFE,CAGEfightR,cageminer,CAGEr,CalibraCurve,CaMutQC,canceR,cardelino,Cardinal,CardinalIO,CARDspa,CARNIVAL,CATALYST,CatsCradle,cbaf,cBioPortalData,CBN2Path,CBNplot,cbpManager,CCAFE,ccfindR,ccImpute,CCPlotR,ccrepe,CDI,celda,CellBarcode,cellbaseR,CellBench,CelliD,cellity,CellMapper,cellmig,CellMixS,cellxgenedp,censcyt,Cepo,CexoR,cfdnakit,cfDNAPro,cfTools,ChemmineOB,ChemmineR,chevreulPlot,chevreulProcess,chevreulShiny,Chicago,chihaya,chipenrich,ChIPexoQual,ChIPpeakAnno,chipseq,Chromatograms,ChromSCape,cigarillo,CIMICE,CircSeqAlignTk,CiteFuse,ClassifyR,cleanUpdTSeq,CleanUpRNAseq,cleaver,clevRvis,clipper,cliProfiler,ClustAll,clusterExperiment,ClusterFoldSimilarity,clusterSeq,ClusterSignificance,clustifyr,ClustIRR,clustSIGNAL,cmapR,CNEr,CNVfilteR,CNVMetrics,CNVRanger,COCOA,CoGAPS,cogeqc,Cogito,coMethDMR,compcodeR,CompoundDb,compSPOT,concordexR,CONFESS,consensusOV,consensusSeekeR,consICA,CONSTANd,conumee,CopyNumberPlots,Coralysis,coRdon,CoreGx,corral,coseq,cosmiq,COTAN,covRNA,CPSM,cpvSNP,crisprBase,crisprBowtie,crisprBwa,crisprDesign,crisprScore,CRISPRseek,crisprShiny,CrispRVariants,crisprVerse,crisprViz,crumblr,crupR,csaw,csdR,CSOA,CSSQ,CTdata,CTDquerier,CTexploreR,ctsGE,CTSV,customCMPdb,cydar,cypress,CyTOFpower,CytoGLMM,cytoKernel,cytomapper,CytoMDS,CytoPipeline,CytoPipelineGUI,cytoviewer,dada2,dagLogo,DAMEfinder,DaMiRseq,Damsel,dandelionR,DAPAR,dcanr,DCATS,ddPCRclust,decompTumor2Sig,decontam,decontX,DeconvoBuddies,deconvR,decoupleR,DeeDeeExperiment,DeepTarget,DEFormats,DegCre,DEGreport,DelayedArray,DelayedDataFrame,DelayedMatrixStats,DelayedRandomArray,DelayedTensor,demuxmix,demuxSNP,densvis,DEP,DepecheR,DepInfeR,derfinder,derfinderHelper,derfinderPlot,DEScan2,DESpace,DEWSeq,DExMA,DEXSeq,DFplyr,DiffBind,diffcyt,DifferentialRegulation,diffuStats,diffUTR,Dino,dir.expiry,DirichletMultinomial,discordant,distinct,dittoSeq,DMCFB,dmGsea,DMRcaller,DMRScan,dmrseq,DNABarcodeCompatibility,DNABarcodes,DNAcycP2,DNAfusion,DNEA,doppelgangR,Doscheda,doseR,DOtools,doubletrouble,dreamlet,DRIMSeq,DropletUtils,drugTargetInteractions,DSS,dStruct,DuplexDiscovereR,dupRadar,easier,EasyCellType,easylift,easyreporting,easyRNASeq,EBImage,EDASeq,edgeR,EGSEA,eiR,eisaR,ELMER,EmpiricalBrownsMethod,ENmix,EnrichDO,EnrichmentBrowser,enrichViewNet,ensembldb,EpiCompare,EpiDISH,epigraHMM,EpiMix,epimutacions,epiNEM,epiregulon,epiregulon.extra,epistack,epistasisGA,EpiTxDb,epivizr,epivizrChart,epivizrData,epivizrServer,epivizrStandalone,erccdashboard,ERSSA,escape,escheR,evaluomeR,EventPointer,EWCE,ExperimentHub,ExperimentHubData,ExperimentSubset,ExploreModelMatrix,extraChIPs,faers,FamAgg,FastqCleaner,fastreeR,fastseg,fCCAC,fCI,fcScan,FEAST,FeatSeekR,FELLA,fenr,fgga,FilterFFPE,findIPs,FindIT2,FinfoMDS,FLAMES,flowAI,flowcatchR,flowGraph,FlowSOM,flowSpecs,fmcsR,fobitools,FRASER,FuseSOM,G4SNVHunter,GA4GHclient,GA4GHshiny,GARS,gatom,GBScleanR,gcapc,GCPtools,gDNAx,gDR,gDRcore,gDRimport,gDRutils,GDSArray,GeDi,gemma.R,GeneExpressionSignature,genefilter,genefu,GeneNetworkBuilder,GeneOverlap,geneplast,geneplotter,GENESIS,GeneStructureTools,GeneTonic,GENIE3,GenomAutomorphism,GenomeInfoDb,GenomicAlignments,GenomicDataCommons,GenomicDistributions,GenomicFeatures,GenomicFiles,GenomicInteractionNodes,GenomicInteractions,GenomicPlot,GenomicRanges,GenomicScores,GenomicSuperSignature,GenomicTuples,geomeTriD,gg4way,ggbio,ggkegg,ggmanh,GGPA,ggseqalign,ggspavis,ggtreeSpace,GladiaTOX,Glimma,glmGamPoi,glmSparseNet,GloScope,gmoviz,GMRP,GNOSIS,GOexpress,GOfuncR,GOp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SCnorm,scone,scoreInvHap,scoup,scp,scPCA,scPipe,scran,scrapper,scReClassify,screenCounter,scRepertoire,scRNAseqApp,scruff,scTHI,scTreeViz,scuttle,scviR,seahtrue,sechm,segmentSeq,selectKSigs,seq.hotSPOT,seqCAT,SeqGate,Seqinfo,seqLogo,seqPattern,seqsetvis,SeqSQC,SeqVarTools,sesame,SETA,SEtools,sevenC,SGSeq,SharedObject,shinyDSP,shinyepico,shinyMethyl,ShortRead,SIAMCAT,SigCheck,signatureSearch,signifinder,SigsPack,SIMD,SimFFPE,similaRpeak,SIMLR,simPIC,simpleSeg,sincell,SingleCellAlleleExperiment,SingleCellExperiment,singleCellTK,SingleR,singscore,SiPSiC,sitadela,Site2Target,sitePath,sketchR,slalom,slingshot,SMAD,smartid,SmartPhos,smoothclust,snapcount,snifter,SNPediaR,SNPhood,SOMNiBUS,sosta,SpaceMarkers,SpaceTrooper,spacexr,SpaNorm,spARI,sparrow,SparseArray,sparseMatrixStats,sparsenetgls,SparseSignatures,spaSim,SpatialCPie,spatialDE,SpatialExperiment,SpatialExperimentIO,spatialFDA,SpatialFeatureExperiment,SpatialOmicsOverlay,speckle,specL,Spectra,SpectralTAD,SpectraQL,SpectriPy,SPIAT,SPICEY,spicyR,spillR,splatter,SplineDV,SPLINTER,splots,spoon,SpotClean,SPOTlight,SpotSweeper,spqn,SPsimSeq,squallms,sRACIPE,srnadiff,sSNAPPY,ssrch,StabMap,stageR,STATegRa,Statial,statTarget,stJoincount,stPipe,strandCheckR,Structstrings,SubCellBarCode,SUITOR,SummarizedExperiment,SuperCellCyto,SurfR,sva,svaRetro,SVMDO,swfdr,switchde,synapsis,SynExtend,synlet,syntenet,systemPipeR,systemPipeShiny,systemPipeTools,tadar,TADCompare,tanggle,TAPseq,TargetDecoy,TargetSearch,TaxSEA,TBSignatureProfiler,TCGAbiolinks,TCGAutils,TDbasedUFE,TDbasedUFEadv,TEKRABber,TENET,TENxIO,tenXplore,terapadog,terraTCGAdata,TFARM,TFBSTools,TFEA.ChIP,TFHAZ,TFutils,tidybulk,tidyCoverage,tidyFlowCore,tidysbml,tidySingleCellExperiment,tidySpatialExperiment,tidySummarizedExperiment,tigre,TileDBArray,timeOmics,TMixClust,TMSig,TOAST,tomoda,tomoseqr,TOP,topconfects,topdownr,topGO,ToxicoGx,TPP,TPP2D,tpSVG,tracktables,trackViewer,TrajectoryUtils,transcriptogramer,transcriptR,transformGamPoi,transmogR,transomics2cytoscape,TreeAndLeaf,treeclimbR,treekoR,TreeSummarizedExperiment,TREG,Trendy,tricycle,TrIdent,tripr,tRNA,tRNAdbImport,tRNAscanImport,TRONCO,TTMap,TurboNorm,TVTB,twoddpcr,txcutr,txdbmaker,UCell,UCSC.utils,Ularcirc,UMI4Cats,uncoverappLib,UniProt.ws,updateObject,UPDhmm,variancePartition,VariantAnnotation,VariantExperiment,VariantFiltering,VCFArray,VDJdive,velociraptor,VERSO,vidger,ViSEAGO,VisiumIO,visiumStitched,vissE,Voyager,vsclust,vsn,wateRmelon,wavClusteR,weitrix,wpm,xCell2,xcms,xcore,XeniumIO,xenLite,Xeva,yamss,YAPSA,zellkonverter,zenith,zinbwave,zitools,ZygosityPredictor,AHEnsDbs,AHLRBaseDbs,AHMeSHDbs,AHPathbankDbs,AHPubMedDbs,AHWikipathwaysDbs,AlphaMissense.v2023.hg19,AlphaMissense.v2023.hg38,ath1121501frmavecs,cadd.v1.6.hg19,cadd.v1.6.hg38,CENTREannotation,CTCF,EpiTxDb.Hs.hg38,EpiTxDb.Mm.mm10,EpiTxDb.Sc.sacCer3,EuPathDB,excluderanges,geneplast.data,GenomicState,hpAnnot,JASPAR2022,JASPAR2024,org.Hbacteriophora.eg.db,phastCons30way.UCSC.hg38,phastCons35way.UCSC.mm39,phyloP35way.UCSC.mm39,rat2302frmavecs,SomaScan.db,synaptome.data,TENET.AnnotationHub,UCSCRepeatMasker,ASICSdata,AssessORFData,AWAggregatorData,BioImageDbs,BioPlex,blimaTestingData,BloodCancerMultiOmics2017,bodymapRat,brgedata,bugphyzz,CardinalWorkflows,celldex,CellMapperData,CENTREprecomputed,cfToolsData,ChIPDBData,chipenrich.data,ChIPexoQualExample,chipseqDBData,CLLmethylation,clustifyrdatahub,CopyhelpeR,CoSIAdata,COSMIC.67,crisprScoreData,curatedBladderData,curatedMetagenomicData,curatedOvarianData,curatedPCaData,curatedTBData,curatedTCGAData,CytoMethIC,DAPARdata,depmap,derfinderData,DExMAdata,DNAZooData,DoReMiTra,dorothea,DropletTestFiles,DuoClustering2018,easierData,ELMER.data,emtdata,eoPredData,epimutacionsData,ewceData,fourDNData,furrowSeg,gDNAinRNAseqData,gDRtestData,GenomicDistributionsData,GeuvadisTranscriptExpr,GSE103322,GSE13015,GSE159526,GSE62944,HarmanData,HCAData,HCATonsilData,HD2013SGI,HDCytoData,healthyControlsPresenceChecker,HelloRangesData,HiCDataHumanIMR90,HiContactsData,HighlyReplicatedRNASeq,Hiiragi2013,HMP16SData,HMP2Data,HumanAffyData,humanHippocampus2024,IHWpaper,imcdatasets,JohnsonKinaseData,LegATo,LRcellTypeMarkers,mCSEAdata,mcsurvdata,MerfishData,MetaGxPancreas,MetaScope,MethylAidData,methylclockData,MethylSeqData,MicrobiomeBenchmarkData,microbiomeDataSets,minionSummaryData,MOFAdata,MouseAgingData,MouseGastrulationData,MouseThymusAgeing,msigdb,MSMB,msqc1,multiWGCNAdata,muscData,muSpaData,nanotubes,NestLink,NetActivityData,nmrdata,OnassisJavaLibs,optimalFlowData,orthosData,pasilla,PasillaTranscriptExpr,PCHiCdata,PepsNMRData,preciseTADhub,ProteinGymR,ptairData,raerdata,rcellminerData,RforProteomics,RGMQLlib,RNAmodR.Data,RnaSeqSampleSizeData,sampleClassifierData,scaeData,scanMiRData,scATAC.Explorer,SCLCBam,scMultiome,scpdata,scRNAseq,seventyGeneData,SFEData,SimBenchData,Single.mTEC.Transcriptomes,SingleCellMultiModal,smokingMouse,SpatialDatasets,spatialDmelxsim,spatialLIBD,STexampleData,SubcellularSpatialData,systemPipeRdata,TabulaMurisData,TabulaMurisSenisData,tartare,TCGAbiolinksGUI.data,TCGAWorkflowData,TENET.ExperimentHub,TENxBrainData,TENxBUSData,TENxPBMCData,TENxVisiumData,TENxXeniumData,timecoursedata,TimerQuant,tissueTreg,TMExplorer,TransOmicsData,tuberculosis,tweeDEseqCountData,VariantToolsData,VectraPolarisData,WeberDivechaLCdata,zebrafishRNASeq,annotation,arrays,CAGEWorkflow,chipseqDB,csawUsersGuide,EGSEA123,ExpressionNormalizationWorkflow,generegulation,highthroughputassays,liftOver,maEndToEnd,recountWorkflow,RNAseq123,seqpac,sequencing,spicyWorkflow,variants, BiocBookDemo, OSTA,aIc,asteRisk,BigDataStatMeth,BiocManager,corrmeta,cyjShiny,DEHOGT,EHRtemporalVariability,genetic.algo.optimizeR,ggBubbles,GSEMA,ipsRdbs,magmaR,MariNET,MarZIC,multiclassPairs,net4pg,openSkies,PlackettLuce,Rediscover,rjsoncons,rworkflows,StepReg,StepRegShiny,TFactSR |
ORCID: 0000-0003-0285-2787, Mike Smith [ctb]