| Suggests | tools,tkWidgets,ALL,RUnit,golubEsets,BiocStyle,knitr,limma |
| Linking To | |
| Enhances | |
| Depends On Me | ACME,affy,affycomp,affyContam,affycoretools,affyPLM,AGDEX,AIMS,altcdfenvs,annaffy,AnnotationDbi,AnnotationForge,ArrayExpress,arrayMvout,BAGS,bandle,BicARE,bigmelon,BioMVCClass,BioQC,BLMA,borealis,CAMERA,cancerclass,Category,categoryCompare,CCPROMISE,CGHbase,CGHcall,CGHregions,clippda,clusterStab,CMA,cn.farms,codelink,convert,copa,covEB,covRNA,CytoMDS,DEXSeq,DFP,diggit,doppelgangR,DSS,dyebias,EBarrays,EDASeq,edge,EGSEA,epivizrData,ExiMiR,ExpressionAtlas,fabia,factDesign,fastseg,flowBeads,frma,gaga,GeneMeta,geneplotter,geneRecommender,GeneRegionScan,GeneSelectMMD,geNetClassifier,GeoDiff,GeomxTools,GEOquery,GOexpress,goProfiles,GOstats,GSEABase,GSEABenchmarkeR,GSEAlm,GWASTools,hapFabia,HELP,hopach,HTqPCR,HybridMTest,iCheck,IdeoViz,idiogram,INSPEcT,isobar,iterativeBMA,IVAS,lumi,made4,massiR,MEAL,MethPed,methylumi,Mfuzz,MiChip,mimager,MiRaGE,miRcomp,MLInterfaces,MMDiff2,monocle,MSnbase,Mulcom,MultiDataSet,multtest,NanoStringDiff,NanoStringNCTools,NanoTube,NOISeq,nondetects,normalize450K,NormqPCR,octad,oligo,omicRexposome,OrderedList,OTUbase,pandaR,panp,pcaMethods,pdInfoBuilder,pepStat,phenoTest,PLPE,POWSC,PREDA,pRolocGUI,PROMISE,qpcrNorm,RbcBook1,rbsurv,rcellminer,ReadqPCR,rexposome,Rmagpie,Rnits,RTopper,RUVSeq,safe,SCAN.UPC,SeqGSEA,SigCheck,siggenes,singleCellTK,SpeCond,SPEM,spkTools,splineTimeR,SummarizedExperiment,tigre,tilingArray,topGO,TPP,tRanslatome,UNDO,VegaMC,viper,vsn,wateRmelon,webbioc,XDE,yarn,EuPathDB,affycompData,ALL,bcellViper,bladderbatch,brgedata,cancerdata,CCl4,CLL,colonCA,CRCL18,curatedBreastData,curatedOvarianData,davidTiling,diggitdata,DLBCL,dressCheck,etec16s,fabiaData,fibroEset,gaschYHS,golubEsets,GSE103322,GSE13015,GSE62944,GSVAdata,harbChIP,HumanAffyData,humanStemCell,Iyer517,kidpack,leeBamViews,leukemiasEset,lumiBarnes,lungExpression,MAQCsubset,MetaGxBreast,miRNATarget,msd16s,mvoutData,Neve2006,PREDAsampledata,ProData,prostateCancerCamcap,prostateCancerGrasso,prostateCancerStockholm,prostateCancerTaylor,prostateCancerVarambally,pumadata,rcellminerData,RUVnormalizeData,SpikeInSubset,TCGAcrcmiRNA,TCGAcrcmRNA,tweeDEseqCountData,yeastCC,crmn,dGAselID,eLNNpairedCov,GWASbyCluster,heatmapFlex,lmQCM,MM2Sdata,MMDvariance,propOverlap |
| Imports Me | a4Base,a4Classif,a4Core,a4Preproc,ABarray,ACE,aCGH,adSplit,affyILM,AgiMicroRna,ANF,annmap,annotate,AnnotationHubData,annotationTools,attract,ballgown,BASiCS,BayesKnockdown,BgeeDB,biobroom,bioCancer,biocViews,BioNet,biosigner,biscuiteer,BiSeq,bnem,BreastSubtypeR,BSgenomeForge,bsseq,CAFE,canceR,Cardinal,CellTrails,cfdnakit,CGHnormaliter,ChIPXpress,ChromHeatMap,cicero,clipper,CluMSID,cn.mops,COCOA,cogena,combi,CompoundDb,ConsensusClusterPlus,consensusOV,coRdon,CoreGx,crlmm,cyanoFilter,cycle,cydar,CytoML,DAPAR,ddCt,DEGreport,DESeq2,destiny,DExMA,discordant,easyRNASeq,EBarrays,ecolitk,EGAD,ensembldb,EpiMix,esetVis,ExiMiR,ffpe,findIPs,flowClust,flowCore,flowFP,flowMatch,flowMeans,flowSpecs,flowStats,flowViz,flowWorkspace,frma,frmaTools,gCrisprTools,gcrma,gemma.R,geneClassifiers,GeneExpressionSignature,genefilter,GeneMeta,geneRecommender,GeneRegionScan,GenomicInteractions,GenomicScores,GenomicSuperSignature,GEOsubmission,gep2pep,ggbio,GlobalAncova,globaltest,GSRI,GSVA,Gviz,HEM,hermes,HTqPCR,HTSFilter,infinityFlow,IsoformSwitchAnalyzeR,katdetectr,kissDE,LiquidAssociation,LRBaseDbi,makecdfenv,MAPFX,maSigPro,MAST,mastR,mBPCR,MeSHDbi,metaseqR2,MethylAid,methylCC,methylclock,methylumi,MiChip,minfi,MinimumDistance,MiPP,MIRA,miRSM,missMethyl,MLSeq,mogsa,Moonlight2R,MoonlightR,MSnID,MultiAssayExperiment,MultiRNAflow,multiscan,mzR,npGSEA,nucleR,oligoClasses,omicade4,omicsViewer,ontoProc,openCyto,oposSOM,oppar,OrganismDbi,panp,phantasus,phantasusLite,PharmacoGx,phyloseq,piano,plgem,plier,PLSDAbatch,podkat,prebs,PrInCE,progeny,pRoloc,PROMISE,PRONE,PROPS,Prostar,protGear,ptairMS,puma,PureCN,pvac,pvca,qcmetrics,QDNAseq,QFeatures,qpgraph,quantiseqr,quantro,QuasR,qusage,RadioGx,randPack,ReactomeGSA,RIVER,Rmagpie,RMassBank,RNAseqCovarImpute,roastgsa,rols,ropls,ROTS,rqubic,rScudo,Rtpca,RUVnormalize,scmap,scTGIF,shinyMethyl,ShortRead,SigsPack,sigsquared,singscore,sitadela,sketchR,SomaticSignatures,SpatialDecon,SpatialFeatureExperiment,SpatialOmicsOverlay,spkTools,SplineDV,SPONGE,standR,STATegRa,subSeq,TDbasedUFEadv,TEQC,TFBSTools,tidyFlowCore,timecourse,TMixClust,TnT,topdownr,ToxicoGx,tradeSeq,TTMap,twilight,txdbmaker,UPDhmm,uSORT,VanillaICE,variancePartition,VariantAnnotation,VariantFiltering,vidger,wateRmelon,wpm,xcms,Xeva,BloodCancerMultiOmics2017,DeSousa2013,DExMAdata,Fletcher2013a,GSE13015,hgu133plus2CellScore,Hiiragi2013,IHWpaper,KEGGandMetacoreDzPathwaysGEO,KEGGdzPathwaysGEO,mcsurvdata,pRolocdata,seqc,signatureSearchData,ExpressionNormalizationWorkflow,GeoMxWorkflows,AnnoProbe,bapred,CIARA,ClassComparison,ClassDiscovery,D4TAlink.light,FMradio,geneExpressionFromGEO,GSEMA,IntegratedJM,maGUI,nlcv,NMF,PCAPAM50,RCPA,RobLox,RPPanalyzer,SCdeconR,scPOEM,ssizeRNA,TailRank |
| Suggests Me | AUCell,autonomics,BiocGenerics,CellMapper,clustComp,ClusterGVis,coseq,cypress,dar,DART,dcanr,dearseq,DeconvoBuddies,DspikeIn,edgeR,EnMCB,EpiDISH,epivizr,epivizrChart,epivizrStandalone,genefu,GENIE3,GenomicPlot,GenomicRanges,GSAR,GSgalgoR,Heatplus,kebabs,les,limma,M3Drop,mCSEA,messina,mitology,MOSim,msa,multiClust,OSAT,pathMED,ribosomeProfilingQC,ROC,RTCGA,scater,scmeth,sparrow,stageR,survcomp,TargetScore,TCGAbiolinks,TFutils,tkWidgets,TOP,vbmp,widgetTools,biotmleData,breastCancerMAINZ,breastCancerNKI,breastCancerTRANSBIG,breastCancerUNT,breastCancerUPP,breastCancerVDX,dorothea,dyebiasexamples,HMP16SData,HMP2Data,mammaPrintData,mtbls2,RegParallel,rheumaticConditionWOLLBOLD,seventyGeneData,yeastExpData,yeastRNASeq,amap,aroma.affymetrix,BaseSet,CimpleG,clValid,CrossValidate,distrDoc,evanverse,GenAlgo,ggpicrust2,hexbin,HTSCluster,isatabr,MetabolSSMF,mi4p,Modeler,multiclassPairs,NACHO,omicsTools,ordinalbayes,Patterns,rsconnect,Seurat,sigminer,SomaDataIO,tinyarray |
| Links To Me | |
| Build Report | Build Report |
