BAGS

This is thedevelopment version of BAGS; for the stable release version, seeBAGS.

A Bayesian Approach for Geneset Selection

DOI: 10.18129/B9.bioc.BAGS

Bioconductor version: Development (3.23)

R package providing functions to perform geneset significance analysis over simple cross-sectional data between 2 and 5 phenotypes of interest.

Author: Alejandro Quiroz-Zarate

Maintainer: Alejandro Quiroz-Zarate <aquiroz at jimmy.harvard.edu>

Citation (from within R, entercitation("BAGS")):

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")# The following initializes usage of Bioc develBiocManager::install(version='devel')BiocManager::install("BAGS")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BAGS")

BAGS: A Bayesian Approach for Geneset Selection.	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Bayesian,Software
Version	2.51.0
In Bioconductor since	BioC 2.13 (R-3.0) (12 years)
License	Artistic-2.0
Depends	R (>= 2.10),breastCancerVDX,Biobase
Imports
System Requirements
URL

Suggests
Linking To
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Depends On Me
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Build Report	Build Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source Package	BAGS_2.51.0.tar.gz
Windows Binary (x86_64)	BAGS_2.51.0.zip (64-bit only)
macOS Binary (x86_64)	BAGS_2.51.0.tgz
macOS Binary (arm64)	BAGS_2.51.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BAGS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BAGS
Bioc Package Browser	https://code.bioconductor.org/browse/BAGS/
Package Short Url	https://bioconductor.org/packages/BAGS/
Package Downloads Report	Download Stats

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