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RTCGA.clinical

This is thedevelopment version of RTCGA.clinical; for the stable release version, seeRTCGA.clinical.

Clinical datasets from The Cancer Genome Atlas Project

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DOI: 10.18129/B9.bioc.RTCGA.clinical


Bioconductor version: Development (3.23)

Package provides clinical datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Clinical data format is explained here https://wiki.nci.nih.gov/display/TCGA/Clinical+Data+Overview. Data from 2015-11-01 snapshot.

Author: Marcin Kosinski <m.p.kosinski at gmail.com>

Maintainer: Marcin Kosinski <m.p.kosinski at gmail.com>

Citation (from within R, entercitation("RTCGA.clinical")):

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))    install.packages("BiocManager")# The following initializes usage of Bioc develBiocManager::install(version='devel')BiocManager::install("RTCGA.clinical")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCGA.clinical")
Using RTCGA to download clinical data as included in RTCGA.clinicalHTMLR Script
Reference ManualPDF
NEWSText

Need some help? Ask on the Bioconductor Support site!

Details

biocViewsAnnotation Data,ExperimentData
Version20151101.41.0
LicenseGPL-2
DependsR (>= 3.2.0),RTCGA
Imports
System Requirements
URL
Bug Reportshttps://github.com/RTCGA/RTCGA/issues
See More
Suggestsrmarkdown,knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests MeRTCGA,TDbasedUFEadv
Links To Me
Build ReportBuild Report

Package Archives

FollowInstallation instructions to use this package in your R session.

Source PackageRTCGA.clinical_20151101.41.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (big-sur-arm64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/RTCGA.clinical
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/RTCGA.clinical
Package Short Urlhttps://bioconductor.org/packages/RTCGA.clinical/
Package Downloads ReportDownload Stats

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