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Transsulfuration pathway

From Wikipedia, the free encyclopedia
Metabolic pathway involving the transfer of a thiol group
The reverse transsulfuration pathway depicting the conversion ofhomocysteine tocysteine in reactions 5 and 6. Reaction 5 is catalyzed bycystathionine beta-synthase while reaction 6 is catalyzed bycystathionine gamma-lyase. The required homocysteine is synthesized frommethionine in reactions 1, 2, and 3.

Thetranssulfuration pathway is ametabolic pathway involving the interconversion ofcysteine andhomocysteine through the intermediatecystathionine. Two transsulfurylation pathways are known: theforward and thereverse.[1]

Theforward pathway is present in several bacteria, such asEscherichia coli[2] andBacillus subtilis,[3] and involves the transfer of the thiol group from cysteine to homocysteine (methionine precursor with the S-methyl group), thanks to the γ-replacement of the acetyl or succinyl group of ahomoserine with cysteine via its thiol group to form cystathionine (catalysed bycystathionine γ-synthase, which is encoded bymetB inE. coli andmetI inB. subtilis). Cystathionine is then cleaved by means of the β-elimination of the homocysteine portion of the molecule leaving behind an unstableimino acid, which is attacked by water to formpyruvate and ammonia (catalysed by the metC-encodedcystathionine β-lyase[4]).The production of homocysteine through transsulfuration allows the conversion of this intermediate tomethionine, through a methylation reaction carried out bymethionine synthase.

Thereverse pathway is present in several organisms, including humans, and involves the transfer of the thiol group from homocysteine to cysteine via a similar mechanism. InKlebsiella pneumoniae thecystathionine β-synthase is encoded bymtcB, while theγ-lyase is encoded bymtcC.[5]Humans areauxotrophic for methionine, hence it is called an "essential amino acid" by nutritionists, but are not for cysteine due to the reverse trans-sulfurylation pathway. Mutations in this pathway lead to a disease known ashomocystinuria, due to homocysteine accumulation.

Role of pyridoxal phosphate

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Part of this section istranscluded fromCys/Met metabolism PLP-dependent enzyme family.(edit |history)

All four transsulfuration enzymes requirevitamin B6 in its active form (pyridoxal phosphate or PLP). Three of these enzymes (cystathionine γ-synthase excluded) are part of theCys/Met metabolism PLP-dependent enzyme family (type I PLP enzymes).There are five different structurally related types of PLP enzymes. Members of this family belong to the type I and are:[6]

  • in thetranssulfurylation route for methionine biosynthesis:
    • Cystathionine γ-synthase (metB) which joins an activated homoserine ester (acetyl or succinyl) with cysteine to form cystathionine
    • Cystathionine β-lyase (metC) which splits cystathionine into homocysteine and a deaminated alanine (pyruvate and ammonia)
  • in the direct sulfurylation pathway for methionine biosynthesis:
    • O-acetyl homoserine sulfhydrylase (metY) which adds a thiol group to an activated homoserine ester
    • O-succinylhomoserine sulfhydrylase (metZ) which adds a thiol group to an activated homoserine ester
  • in the reverse transsulfurylation pathway for cysteine biosynthesis:
    • Cystathionine γ-lyase (no common gene name) which joins an activated serine ester (acetyl or succinyl) with homocysteine to form cystathionine
    • Not Cystathionine β-synthase which is a PLP enzyme type II
  • cysteine biosynthesis from serine:
    • O-acetyl serine sulfhydrylase (cysK orcysM) which adds a thiol group to an activated serine ester
  • methionine degradation:
  • Methionine gamma-lyase (mdeA) which breaks down methionine at the thioether and amine bounds

Note: MetC, metB, metZ are closely related and have fuzzy boundaries so fall under the same NCBI orthologue cluster (COG0626).[6]

Direct sulfurization

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The direct sulfurylation pathways for the synthesis of cysteine or homocysteine proceeds via the replacement of the acetyl/succinyl group with free sulfide (via thecysK orcysM -encoded cysteine synthase.[7] and themetZ ormetY -encoded homocysteine synthase,[8]

References

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  1. ^Weekley, C. M. and Harris, H. H. (2013). "Which form is that? The importance of selenium speciation and metabolism in the prevention and treatment of disease".Chem. Soc. Rev.42 (23):8870–8894.doi:10.1039/c3cs60272a.PMID 24030774.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  2. ^Aitken, S. M.; Lodha, P. H.; Morneau, D. J. K. (2011). "The enzymes of the transsulfuration pathways: Active-site characterizations".Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics.1814 (11):1511–7.doi:10.1016/j.bbapap.2011.03.006.PMID 21435402.
  3. ^Auger, S.; Yuen, W. H.; Danchin, A.; Martin-Verstraete, I. (2002)."The metIC operon involved in methionine biosynthesis in Bacillus subtilis is controlled by transcription antitermination".Microbiology.148 (Pt 2):507–518.doi:10.1099/00221287-148-2-507.hdl:10722/42040.PMID 11832514.
  4. ^Clausen, T.; Huber, R.; Laber, B.; Pohlenz, H. D.; Messerschmidt, A. (1996). "Crystal Structure of the Pyridoxal-5′-phosphate Dependent Cystathionine β-lyase fromEscherichia coliat 1.83 Å".Journal of Molecular Biology.262 (2):202–224.doi:10.1006/jmbi.1996.0508.PMID 8831789.
  5. ^Seiflein, T. A.; Lawrence, J. G. (2006)."Two Transsulfurylation Pathways in Klebsiella pneumoniae".Journal of Bacteriology.188 (16):5762–5774.doi:10.1128/JB.00347-06.PMC 1540059.PMID 16885444.
  6. ^abFerla MP, Patrick WM (2014)."Bacterial methionine biosynthesis".Microbiology.160 (Pt 8):1571–84.doi:10.1099/mic.0.077826-0.PMID 24939187.
  7. ^Rabeh, W. M.; Cook, P. F. (2004)."Structure and Mechanism of O-Acetylserine Sulfhydrylase".Journal of Biological Chemistry.279 (26):26803–26806.doi:10.1074/jbc.R400001200.PMID 15073190.
  8. ^Hwang, B. J.; Yeom, H. J.; Kim, Y.; Lee, H. S. (2002)."Corynebacterium glutamicum utilizes both transsulfuration and direct sulfhydrylation pathways for methionine biosynthesis".Journal of Bacteriology.184 (5):1277–1286.doi:10.1128/JB.184.5.1277-1286.2002.PMC 134843.PMID 11844756.
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