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Oligopeptide

From Wikipedia, the free encyclopedia
Peptide consisting of two to twenty amino acids
A tripeptide (exampleVal-Gly-Ala) with
green markedamino end (L-Valine) and
blue markedcarboxyl end (L-Alanine)
A tetrapeptide (exampleVal-Gly-Ser-Ala) with
green markedamino end (L-valine) and
blue markedcarboxyl end (L-alanine)

Anoligopeptide (oligo-, "a few"), is apeptide consisting of two to twentyamino acids, includingdipeptides,tripeptides,tetrapeptides, and other polypeptides. Some of the major classes of naturally occurring oligopeptides includeaeruginosins,cyanopeptolins,microcystins,microviridins,microginins,anabaenopeptins, andcyclamides. Microcystins are best studied because of their potential toxicity impact in drinking water.[1] A review of some oligopeptides found that the largest class are the cyanopeptolins (40.1%), followed by microcystins (13.4%).[2]

Production

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Oligopeptide classes are produced bynonribosomal peptides synthases (NRPS), except cyclamides and microviridins are synthesized throughribosomic pathways.[3]

Examples

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Examples of oligopeptides include:[4]

  • Amanitins - Cyclic peptides taken from carpophores of several different mushroom species. They are potent inhibitors ofRNA polymerases in most eukaryotic species, the prevent the production of mRNA and protein synthesis. These peptides are important in the study of transcription. Alpha-amanitin is the main toxin from the speciesAmanita phalloides, poisonous if ingested by humans or animals.
  • Antipain - An oligopeptide produced by various bacteria which acts as aprotease inhibitor.
  • Ceruletide - A specific decapeptide found in the skin ofHyla caerulea, theAustralian green tree frog. Ceruletide has very much in common with regards to action and composition tocholecystokinin. It stimulates gastric, biliary, and pancreatic secretion; and certainsmooth muscle. It is used to inducepancreatitis in experimental animal models.
  • Glutathione - A tripeptide with many roles in cells. It conjugates to drugs to make them more soluble for excretion, is a cofactor for some enzymes, is involved in protein disulfide bond rearrangement and reduces peroxides.
  • Leupeptins - A group of acylated oligopeptides produced by Actinomycetes that function as protease inhibitors. They have been known to inhibit to varying degreestrypsin,plasmin,kallikreins,papain and thecathepsins.
  • Netropsin - A basic oligopeptide isolated fromStreptomyces netropsis. It is cytotoxic and its strong, specific binding to A-T areas of DNA is useful to genetics research.
  • Pepstatins -N-acylated oligopeptides isolated from culture filtrates of Actinomycetes, which act specifically to inhibit acid proteases such as pepsin and renin.
  • Peptide T -N-(N-(N(2)-(N-(N-(N-(N-D-AlanylL-seryl)-L-threonyl)-L-threonyl)L-threonyl)-L-asparaginyl)-L-tyrosyl)L-threonine. Octapeptide sharingsequence homology with HIV envelope protein gp120. It may be useful as antiviral agent in AIDS therapy. The core pentapeptide sequence, TTNYT, consisting of amino acids 4-8 in peptide T, is the HIV envelope sequence required for attachment to the CD4 receptor.
  • Phalloidin - A very toxic polypeptide isolated mainly fromAmanita phalloides (Agaricaceae) or death cap; causes fatal liver, kidney and CNS damage in mushroom poisoning; used in the study of liver damage.
  • Teprotide - A man-made nonapeptide (Pyr-Trp-Pro-Arg-Pro-Gln-Ile-Pro-Pro) which is exactly the same as the peptide from the venom of the snake, Bothrops jararaca. It inhibits kininase II and angiotensin I and has been proposed as an antihypertensive agent.
  • Tuftsin -N(2)-((1-(N(2)-L-Threonyl)-L-lysyl)-L-prolyl)-L-arginine. A tetrapeptide manufactured in the spleen by enzymatic cleavage of a leukophilic gamma-globulin. It stimulates the phagocytic activity of blood polymorphonuclear leukocytes and neutrophils in particular. The peptide is located in the Fd fragment of the gamma-globulin molecule.

See also

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References

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  1. ^Martin Welker; Hans Von Döhren (2006)."Cyanobacterial peptides – Nature's own combinatorial biosynthesis".FEMS Microbiology Reviews.30 (4):530–563.doi:10.1111/j.1574-6976.2006.00022.x.PMID 16774586.
  2. ^George E. Chlipala; Shunyan Mo; Jimmy Orjala (2011)."Chemodiversity in Freshwater and Terrestrial Cyanobacteria – a Source for Drug Discovery".Curr Drug Targets.12 (11):1654–73.doi:10.2174/138945011798109455.PMC 3244969.PMID 21561419.
  3. ^Ramsy Agha; Samuel Cirés; Lars Wörmer; Antonio Quesada (2013)."Limited Stability of Microcystins in Oligopeptide Compositions of Microcystis aeruginosa (Cyanobacteria): Implications in the Definition of Chemotypes".Toxins.5 (6):1089–1104.doi:10.3390/toxins5061089.PMC 3717771.PMID 23744054.
  4. ^Argos, Patrick."An Investigation of Oligopeptides Linking Domains in Protein Tertiary Structures and Possible Candidates for General Gene Fusion"(PDF). European Molecular Biology Laboratory. Archived fromthe original(PDF) on 28 July 2014. Retrieved28 July 2014.

External links

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Look upoligopeptide in Wiktionary, the free dictionary.
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