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Nephrin

From Wikipedia, the free encyclopedia
Mammalian protein found in Homo sapiens
NPHS1
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

4ZRT

Identifiers
AliasesNPHS1, CNF, NPHN, nephrin, NPHS1 nephrin, nephrin, NPHS1 adhesion molecule, nephrin
External IDsOMIM:602716;MGI:1859637;HomoloGene:20974;GeneCards:NPHS1;OMA:NPHS1 - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for NPHS1
Genomic location for NPHS1
Band19q13.12Start35,825,372bp[1]
End35,869,287bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for NPHS1
Genomic location for NPHS1
Band7|7 B1Start30,157,740bp[2]
End30,186,648bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • buccal mucosa cell

  • body of pancreas

  • vena cava

  • tendon of biceps brachii

  • Skeletal muscle tissue of rectus abdominis

  • glomerulus

  • metanephric glomerulus

  • human kidney

  • mucosa of pharynx

  • nipple
Top expressed in
  • glomerulus

  • embryo

  • embryo

  • morula

  • neural layer of retina

  • gastrula

  • blastocyst

  • dentate gyrus of hippocampal formation granule cell

  • right kidney

  • pancreas
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4868

54631

Ensembl

ENSG00000161270

ENSMUSG00000006649

UniProt

O60500

Q9QZS7

RefSeq (mRNA)

NM_004646

NM_019459

RefSeq (protein)

NP_004637

NP_062332

Location (UCSC)Chr 19: 35.83 – 35.87 MbChr 7: 30.16 – 30.19 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Nephrin is aprotein necessary for the proper functioning of therenal filtration barrier. The renal filtration barrier consists of fenestrated endothelial cells, the glomerular basement membrane, and thepodocytes of epithelial cells. Nephrin is atransmembrane protein that is a structural component of theslit diaphragm.[5] It is present on the tips of the podocytes as an intricate mesh connecting adjacentfoot processes. Nephrin contributes to the strong size selectivity of the slit diaphragm,[6][7] however, the relative contribution of the slit diaphragm to exclusion of protein by the glomerulus is debated.[6][8] The extracellular interactions, both homophilic and heterophilic—between nephrin andNEPH1—are not completely understood.[6] In addition to eightimmunoglobulin G–like motifs and afibronectin type 3 repeat, nephrin has a single transmembrane domain and a short intracellular tail.[6][7] Tyrosine phosphorylation at different sites on the intracellular tail contribute to the regulation of slit diaphragm formation during development[7] and repair in pathology affecting podocytes.[6][7]Podocin may interact with nephrin to guide it ontolipid rafts in podocytes, requiring the integrity of an arginine residue of nephrin at position 1160.[7]

A defect in the gene for nephrin,NPHS1, is associated withcongenital nephrotic syndrome ofthe Finnish type and causes massive amounts of protein to be leaked into the urine, orproteinuria. Nephrin is also required for cardiovascular development.[9]

Interactions

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Nephrin has been shown tointeract with:

See also

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References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000161270Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000006649Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: NPHS1 nephrosis 1, congenital, Finnish type (nephrin)".
  6. ^abcdePatrakka J, Tryggvason K (2007). "Nephrin – a unique structural and signaling protein of the kidney filter".Trends in Molecular Medicine.13 (9):396–403.doi:10.1016/j.molmed.2007.06.006.PMID 17766183.
  7. ^abcdeMartin CE, Jones N (2018)."Nephrin Signaling in the Podocyte: An Updated View of Signal Regulation at the Slit Diaphragm and Beyond".Frontiers in Endocrinology.9.doi:10.3389/fendo.2018.00302.PMC 5996060.PMID 29922234. Art. No. 302.
  8. ^Menzel S, Moeller MJ (2011)."Role of the podocyte in proteinuria".Pediatric Nephrology.26:1775–1780.doi:10.1007/s00467-010-1725-5.PMC 3163769.PMID 21184239.
  9. ^Wagner N, Morrison H, Pagnotta S, Michiels JF, Schwab Y, Tryggvason K, Schedl A, Wagner KD (2011-03-29)."The podocyte protein nephrin is required for cardiac vessel formation".Human Molecular Genetics.20 (11):2182–94.doi:10.1093/hmg/ddr106.PMID 21402589.
  10. ^abcdLehtonen S, Lehtonen E, Kudlicka K, Holthöfer H, Farquhar MG (Sep 2004)."Nephrin forms a complex with adherens junction proteins and CASK in podocytes and in Madin-Darby canine kidney cells expressing nephrin".Am. J. Pathol.165 (3):923–36.doi:10.1016/S0002-9440(10)63354-8.PMC 1618613.PMID 15331416.
  11. ^Lahdenperä J, Kilpeläinen P, Liu XL, Pikkarainen T, Reponen P, Ruotsalainen V, Tryggvason K (Aug 2003)."Clustering-induced tyrosine phosphorylation of nephrin by Src family kinases".Kidney Int.64 (2):404–13.doi:10.1046/j.1523-1755.2003.00097.x.PMID 12846735.
  12. ^Verma R, Wharram B, Kovari I, Kunkel R, Nihalani D, Wary KK, Wiggins RC, Killen P, Holzman LB (Jun 2003)."Fyn binds to and phosphorylates the kidney slit diaphragm component Nephrin".J. Biol. Chem.278 (23):20716–23.doi:10.1074/jbc.M301689200.PMID 12668668.
  13. ^Liu G, Kaw B, Kurfis J, Rahmanuddin S, Kanwar YS, Chugh SS (Jul 2003)."Neph1 and nephrin interaction in the slit diaphragm is an important determinant of glomerular permeability".J. Clin. Invest.112 (2):209–21.doi:10.1172/JCI18242.PMC 164293.PMID 12865409.
  14. ^Gerke P, Huber TB, Sellin L, Benzing T, Walz G (Apr 2003)."Homodimerization and heterodimerization of the glomerular podocyte proteins nephrin and NEPH1".J. Am. Soc. Nephrol.14 (4):918–26.doi:10.1097/01.ASN.0000057853.05686.89.PMID 12660326.
  15. ^Schwarz K, Simons M, Reiser J, Saleem MA, Faul C, Kriz W, Shaw AS, Holzman LB, Mundel P (Dec 2001)."Podocin, a raft-associated component of the glomerular slit diaphragm, interacts with CD2AP and nephrin".J. Clin. Invest.108 (11):1621–9.doi:10.1172/JCI12849.PMC 200981.PMID 11733557.

Further reading

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External links

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