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Herpesvirus glycoprotein B

From Wikipedia, the free encyclopedia
Viral glycoprotein
Protein domain
Herpesvirus Glycoprotein B (PH-like 2)
Crystallographic structure of glycoprotein B fromherpes simplex virus type 1.[1]
Identifiers
SymbolGlycoprot_B_PH2
PfamPF17417
InterProIPR038631
OPM superfamily109
OPM protein3nw8
Available protein structures:
Pfam  structures /ECOD  
PDBRCSB PDB;PDBe;PDBj
PDBsumstructure summary
Protein family
Herpesvirus Glycoprotein B (PH-like 1)
Identifiers
SymbolGlycoprot_B_PH1
PfamPF17416
InterProIPR035377
Available protein structures:
Pfam  structures /ECOD  
PDBRCSB PDB;PDBe;PDBj
PDBsumstructure summary
Protein domain
Herpesvirus glycoprotein Bectodomain
Identifiers
SymbolGlycoprotein_B
PfamPF00606
Available protein structures:
Pfam  structures /ECOD  
PDBRCSB PDB;PDBe;PDBj
PDBsumstructure summary

Herpesvirus glycoprotein B is aviralglycoprotein that is involved in theviral cell entry ofHerpes simplex virus (HSV).Herpesviruses have alipid bilayer, called theenvelope, which contains twelve surface glycoproteins. Forinfectivity to be attained, the double strandedDNA genome of HSV must enter the host cell through means of fusion of its envelope with thecellular membrane or viaendocytosis. Other viral glycoproteins involved in the process of viral cell entry include gC, gB, gD, gH, and gL, but only gC, gB, gD, and gH are required for the fusion of the HSV's envelope with the cellular membrane. It can be noted that all herpesviruses have glycoproteins gB, gH, and gL.[2]

Structure

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The herpesvirus glycoprotein B is atype-1 transmembrane protein with a signal sequence at its N terminus.[2] Thecrystal structure of herpes simplex virus (HSV) type-1 andEpstein–Barr virus glycoprotein Bectodomains were solved as a trimer, revealing five structural domains (I-V).[3][4] Domain I contains two internal fusion loops, thought to insert into the cellular membrane during virus-cell fusion.[5] In HSV, domain II is hypothesized to interact with another herpesvirus glycoprotein, gH/gL, during the fusion process.[6] Domain III consists of a structurally important elongated alpha helix, while domain IV is hypothesized to interact with cellular receptors.[7] Finally, domain V acts in conjunction with domain I during protein-lipid interactions. In HSV, neutralizingmonoclonal antibodies map to structural domains I, II, IV and V.[7] Due to its unique structure, herpesvirus glycoprotein B (along with vesicular stomatitis virus glycoprotein G and baculovirus gp64) belongs to a new class of viral membrane fusion glycoproteins, class III.[3]

Function

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The herpesvirus glycoprotein B is the most highly conserved of all surface glycoproteins and acts primarily as afusion protein. The precise functions of gB and gH/gL are unknown but they are required for viral entry into the cell and constitute the core fusion machinery. The claim that gB is involved in fusion comes from the notable syncytial phenotype caused by certain mutations within thecytoplasmic domain of glycoprotein B,[8] as well as its structural homology to other viral fusion proteins.[3]

References

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  1. ^PDB:3NW8​;Stampfer SD, Lou H, Cohen GH, Eisenberg RJ, Heldwein EE (December 2010)."Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1".J. Virol.84 (24):12924–33.doi:10.1128/JVI.01750-10.PMC 3004323.PMID 20943984.
  2. ^abPereira L, Ali M, Kousoulas K, Huo B, Banks T (September 1989). "Domain structure of herpes simplex virus 1 glycoprotein B: neutralizing epitopes map in regions of continuous and discontinuous residues".Virology.172 (1):11–24.doi:10.1016/0042-6822(89)90102-5.PMID 2475970.
  3. ^abcHeldwein EE, Lou H, Bender FC, Cohen GH, Eisenberg RJ, Harrison SC (July 2006). "Crystal structure of glycoprotein B from herpes simplex virus 1".Science.313 (5784):217–20.Bibcode:2006Sci...313..217H.CiteSeerX 10.1.1.412.1906.doi:10.1126/science.1126548.PMID 16840698.S2CID 15532098.
  4. ^Backovic M, Longnecker R, Jardetzky TS (February 2009)."Structure of a trimeric variant of the Epstein-Barr virus glycoprotein B".Proc. Natl. Acad. Sci. U.S.A.106 (8):2880–5.Bibcode:2009PNAS..106.2880B.doi:10.1073/pnas.0810530106.PMC 2650359.PMID 19196955.
  5. ^Hannah BP, Cairns TM, Bender FC, Whitbeck JC, Lou H, Eisenberg RJ, Cohen GH (July 2009)."Herpes simplex virus glycoprotein B associates with target membranes via its fusion loops".J. Virol.83 (13):6825–36.doi:10.1128/JVI.00301-09.PMC 2698560.PMID 19369321.
  6. ^Atanasiu D, Whitbeck JC, de Leon MP, Lou H, Hannah BP, Cohen GH, Eisenberg RJ (April 2010)."Bimolecular complementation defines functional regions of Herpes simplex virus gB that are involved with gH/gL as a necessary step leading to cell fusion".J. Virol.84 (8):3825–34.doi:10.1128/JVI.02687-09.PMC 2849501.PMID 20130048.
  7. ^abBender FC, Samanta M, Heldwein EE, de Leon MP, Bilman E, Lou H, Whitbeck JC, Eisenberg RJ, Cohen GH (April 2007)."Antigenic and mutational analyses of herpes simplex virus glycoprotein B reveal four functional regions".J. Virol.81 (8):3827–41.doi:10.1128/JVI.02710-06.PMC 1866100.PMID 17267495.
  8. ^"datasheets.scbt.com"(PDF).

Further reading

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This article incorporates text from the public domainPfam andInterPro:IPR000234
DNA
linear ds-DNA
(Duplodnaviria,
Varidnaviria)
Herpes simplex
VSPs:
capsid:
VNPs:
Vaccinia
VNPs:
Adenoviridae
VNPs:
circular ds-DNA
(Duplodnaviria,
Varidnaviria?)
Epstein–Barr
VSPs:
VNPs:
ncRNA:
Baculoviridae
VNPs:
other
(Riboviria,
Monodnaviria)
Polyomaviridae
(SV40,MPyV,MCPyV,HaPyV)
(non-enveloped circular ds-DNA)
VSPs:
capsid:
VNPs:
oncoprotein:
Hepatitis B
(circular partially ds-DNA)
VSPs:
VNPs:
RNA
ds-RNA
(Riboviria)
Rotavirus
(Duplornaviricota)
VNPs:
Rhinov.,Polio,Hep A,
etc. (Pisuviricota)
VNPs:
ss-RNA
positive-sense
(Riboviria)
Hepatitis C
(Kitrinoviricota)
VSPs:
VNPs:
SARS-CoV-2
(Pisuviricota)
VSPs:
VNPs:
ss-RNA
negative-sense
(Negarnaviricota)
Influenza virus
VSPs:
capsid:
glycoprotein:
VNPs:
Parainfluenza
VSPs:
glycoprotein:
Mumps
VSPs:
glycoprotein:
Measles
VSPs:
glycoprotein:
RSV
VSPs:
glycoprotein:
Zaire ebolavirus
VSPs:
capsid:
Indiana vesiculovirus
VSPs:
capsid:
RT
Structure and genome of HIV
VSPs:
VRAPs:
Multiple
Fusion protein
oncoprotein:
Stub icon

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