Movatterモバイル変換


[0]ホーム

URL:


Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
Thehttps:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

NIH NLM Logo
Log inShow account info
Access keysNCBI HomepageMyNCBI HomepageMain ContentMain Navigation
pubmed logo
Advanced Clipboard
User Guide

Full text links

Wiley full text link Wiley Free PMC article
Full text links

Actions

Review
.2021 May;14(3):829-858.
doi: 10.1111/1751-7915.13746. Epub 2021 Jan 13.

Metabolic energy conservation for fermentative product formation

Affiliations
Review

Metabolic energy conservation for fermentative product formation

Pauline L Folch et al. Microb Biotechnol.2021 May.

Abstract

Microbial production of bulk chemicals and biofuels from carbohydrates competes with low-cost fossil-based production. To limit production costs, high titres, productivities and especially high yields are required. This necessitates metabolic networks involved in product formation to be redox-neutral and conserve metabolic energy to sustain growth and maintenance. Here, we review the mechanisms available to conserve energy and to prevent unnecessary energy expenditure. First, an overview of ATP production in existing sugar-based fermentation processes is presented. Substrate-level phosphorylation (SLP) and the involved kinase reactions are described. Based on the thermodynamics of these reactions, we explore whether other kinase-catalysed reactions can be applied for SLP. Generation of ion-motive force is another means to conserve metabolic energy. We provide examples how its generation is supported by carbon-carbon double bond reduction, decarboxylation and electron transfer between redox cofactors. In a wider perspective, the relationship between redox potential and energy conservation is discussed. We describe how the energy input required for coenzyme A (CoA) and CO2 binding can be reduced by applying CoA-transferases and transcarboxylases. The transport of sugars and fermentation products may require metabolic energy input, but alternative transport systems can be used to minimize this. Finally, we show that energy contained in glycosidic bonds and the phosphate-phosphate bond of pyrophosphate can be conserved. This review can be used as a reference to design energetically efficient microbial cell factories and enhance product yield.

© 2021 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

PubMed Disclaimer

Conflict of interest statement

The authors declare that there are no conflicts of interest related to this work.

Figures

Fig. 1
Fig. 1
Conservation of additional metabolic energy in the product pathway to improve product yield. On the left, classical aerobic bioconversion where part of the substrate is diverted away from product formation by dissimilation to fulfil the cells energy requirement. On the right, improved product formation by capturing metabolic energy in the product‐forming pathways.
Fig. 2
Fig. 2
Microbial glycolytic pathways (A) and their overall reaction equations (B).
Fig. 3
Fig. 3
Conversion of PEP, pyruvate and acetyl‐phosphate into final products of fermentation processes.
Fig. 4
Fig. 4
Reactions contributing to energy formation via substrate‐level phosphorylation. Conversions of (A) 1,3‐bisphophoglycerate to 3‐phosphoglycerate; (B) phosphoenolpyruvate (PEP) to pyruvate; (C) carbamoyl‐phosphate to carbamate; (D) acetyl‐phosphate to acetate; (E) propionyl‐phosphate to propionate; (F) succinyl‐CoA to succinate; (G) butyryl‐phosphate to butyrate and (H) acetyl‐CoA and oxaloacetate to citrate. Red arrows: reactions with strong negative ΔG0’, green arrows: reaction sequences to harvest ATP; blue arrows: electron transfer. Blue boxes: overall conversions involving redox cofactors.
Fig. 5
Fig. 5
Gibbs free energy (ΔGm’) of hydrolysis of (A) acyl‐CoA and (B) carboxy‐acyl‐CoA molecules of different carbon lengths. (A) C1: formyl‐CoA + H2O = formate + CoA; C2: acetyl‐CoA + H2O = acetate + CoA; C3: propionyl‐CoA + H2O = propionate + CoA; C4: butyryl‐CoA + H2O = butyrate + CoA; C5: valeryl‐CoA + H2O = valerate + CoA; C6: hexanoyl‐CoA + H2O = hexanoate + CoA; C9: nonanoyl‐CoA + H2O = nonanoate + CoA; C10: decanoyl‐CoA + H2O = decanoate + CoA. (B) C2: oxalyl‐CoA + H2O = oxalate + CoA; C3: malonyl‐CoA + H2O = malonate + CoA; C4: Succinyl‐CoA + H2O = succinate + CoA; C5: glutaryl‐CoA + H2O = glutarate + CoA; C6: Adipyl‐CoA + H2O = adipate + CoA; C7: pimeloyl‐CoA + H2O = pimelate + CoA. The green lines show the ΔGm’ required to create phosphate‐phosphate bonds to convert ADP into ATP and 2 Pi into PPi.
Fig. 6
Fig. 6
(A) Fumarate reduction inE. coli using NADH dehydrogenase I as electron donor, (B) Reduction of crotonyl‐CoA to butyryl‐CoA inClostridium kluyveri and (C) Reduction of caffeyl‐CoA to hydrocaffeyl‐CoA inAcetobacterium woodii using H2 as electron donor.
Fig. 7
Fig. 7
Redox potential profile of various couples as a function of the oxidation percentage. The colours depict the type of chemical reaction in the redox couples. Dark blue: reduction of carbon‐carbon double bonds, orange: reduction of aldehydes to alcohols, green: reduction of 2‐oxo acids into amino acids, red: reduction and oxidation of redox cofactors, purple: oxidative decarboxylation of organic acids, light blue: oxidation of aldehydes into organic acids and black: oxidative decarboxylation of 2‐oxo acids. The graph is limited to a maximum redox potential of 0.1 V since redox couples with higher potentials are involved in respiration. The values were calculated using eQuilibrator 2.2.
Fig. 8
Fig. 8
(A) Fatty acid chain elongation by the fatty acid synthesis pathway requires ATP input in the conversion of acetyl‐CoA into malonyl‐CoA and for the upgrade of NADH produced in glycolysis to NADPH required for fatty acid synthesis. B. The β‐oxidation pathway is chemically very similar. The acyl‐CoA dehydrogenase/Etf determine the direction of the cycle towards fatty acid breakdown. C. Reversal of the β‐oxidation pathway is possible by introducing an NADH‐dependent trans‐enoyl‐CoA reductase (red arrow) and results in a pathway that generates 1 ATP per chain elongation.
Fig. 9
Fig. 9
(A) Hydrolysis and phosphorylation of sugars. (B) Conversion of pyruvate to propionyl‐CoA via either a combination of pyruvate decarboxylase and methylmalonyl‐CoA decarboxylase or via methylmalonyl‐CoA carboxytransferase.
Fig. 10
Fig. 10
Energy conservation using PPi hydrolysis by using (A) membrane‐bound pyrophosphatases and (B) PPi‐dependent phosphofructokinases.
See this image and copyright information in PMC

References

    1. Abdel‐Rahman, M.A. , Tashiro, Y. , and Sonomoto, K. (2013) Recent advances in lactic acid production by microbial fermentation processes. Biotechnol Adv 31: 877–902. - PubMed
    1. Arechaga, I. , Butler, P.J.G. , and Walker, J.E. (2002) Self‐assembly of ATP synthase subunit c rings. FEBS Lett 515: 189–193. - PubMed
    1. Atsumi, S. , Cann, A.F. , Connor, M.R. , Shen, C.R. , Smith, K.M. , Brynildsen, M.P. , et al. (2008) Metabolic engineering of Escherichia coli for 1‐butanol production. Metab Eng 10: 305–311. - PubMed
    1. Baldwin, R.L. , and Milligan, L.P. (1964) Electron transport in Peptostreptococcus elsdenii. Biochimica et Biophysica Acta (BBA) . ‐ Specialized Section on Enzymological Subjects 92: 421–432. - PubMed
    1. Bar‐Even, A. , Flamholz, A. , Noor, E. , and Milo, R. (2012) Thermodynamic constraints shape the structure of carbon fixation pathways. Biochimica et Biophysica Acta (BBA) ‐ . Bioenergetics 1817: 1646–1659. - PubMed

Publication types

MeSH terms

LinkOut - more resources

Full text links
Wiley full text link Wiley Free PMC article
Cite
Send To

NCBI Literature Resources

MeSHPMCBookshelfDisclaimer

The PubMed wordmark and PubMed logo are registered trademarks of the U.S. Department of Health and Human Services (HHS). Unauthorized use of these marks is strictly prohibited.


[8]ページ先頭

©2009-2025 Movatter.jp